RNA–Protein interactions for RNA: ENST00000602287.5

SFXN2-204, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-204ENST00000602287 KRT40Q6A162 431 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 SPRED2Q7Z698 418 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 SGMS1Q86VZ5 419 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 TRIM50Q86XT4 487 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 MYOCDQ8IZQ8 938 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 GDPD5Q8WTR4 605 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 SAMD11Q96NU1 681 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 SUGCTQ9HAC7 445 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 SETD4Q9NVD3 440 aa17.49■□□□□ 0.39
SFXN2-204ENST00000602287 SPDYE3A6NKU9 549 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 TCF7P36402 384 aaPredicted RBP17.48■□□□□ 0.39
SFXN2-204ENST00000602287 KCNQ1P51787 676 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 FAM26DQ5JW98 314 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 UTP14CQ5TAP6 766 aaKnown RBP17.48■□□□□ 0.39
SFXN2-204ENST00000602287 FAM117BQ6P1L5 589 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 TAF2Q6P1X5 1199 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.48■□□□□ 0.39
SFXN2-204ENST00000602287 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 RPAINQ86UA6 219 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 FANCBQ8NB91 859 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 SP7Q8TDD2 431 aaPredicted RBP17.48■□□□□ 0.39
SFXN2-204ENST00000602287 LMBR1Q8WVP7 490 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 EHMT1Q9H9B1 1298 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
SFXN2-204ENST00000602287 RPLP2P05387 115 aaKnown RBP17.47■□□□□ 0.39
SFXN2-204ENST00000602287 CTSHP09668 335 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 KCNA2P16389 499 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 RXRAP19793 462 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 ARHGAP4P98171 946 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 SP4Q02446 784 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 MTMR1Q13613 665 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 CMTR1Q8N1G2 835 aaKnown RBP17.47■□□□□ 0.39
SFXN2-204ENST00000602287 TOP1MTQ969P6 601 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 ERAP1Q9NZ08 941 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 MTUS1Q9ULD2 1270 aa17.47■□□□□ 0.39
SFXN2-204ENST00000602287 BMP2KLQ5H9B9 411 aa17.46■□□□□ 0.39
SFXN2-204ENST00000602287 RSPH3Q86UC2 560 aa17.46■□□□□ 0.39
SFXN2-204ENST00000602287 MICU3Q86XE3 530 aa17.46■□□□□ 0.39
SFXN2-204ENST00000602287 FBXO22Q8NEZ5 403 aa17.46■□□□□ 0.39
SFXN2-204ENST00000602287 SEPT1Q8WYJ6 367 aa17.46■□□□□ 0.39
SFXN2-204ENST00000602287 YME1L1Q96TA2 773 aa17.46■□□□□ 0.39
SFXN2-204ENST00000602287 IFIH1Q9BYX4 1025 aaKnown RBP17.46■□□□□ 0.39
SFXN2-204ENST00000602287 RBM28Q9NW13 759 aaKnown RBP17.46■□□□□ 0.39
SFXN2-204ENST00000602287 UBIAD1Q9Y5Z9 338 aa17.46■□□□□ 0.39
SFXN2-204ENST00000602287 ATP9AO75110 1047 aa17.45■□□□□ 0.38
SFXN2-204ENST00000602287 ITGB5P18084 799 aa17.45■□□□□ 0.38
SFXN2-204ENST00000602287 PPFIA1Q13136 1202 aa17.45■□□□□ 0.38
SFXN2-204ENST00000602287 PPP1R18Q6NYC8 613 aa17.45■□□□□ 0.38
SFXN2-204ENST00000602287 HEATR3Q7Z4Q2 680 aa17.45■□□□□ 0.38
SFXN2-204ENST00000602287 SMARCAD1Q9H4L7 1026 aa17.45■□□□□ 0.38
SFXN2-204ENST00000602287 PCDHA6Q9UN73 950 aa17.45■□□□□ 0.38
SFXN2-204ENST00000602287 PCDHA8Q9Y5H6 950 aa17.45■□□□□ 0.38
SFXN2-204ENST00000602287 hCG_1984214I3L0E3 225 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 UBE2SQ16763 222 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 PTPROQ16827 1216 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 APOA5Q6Q788 366 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 CCDC82Q8N4S0 544 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 ZNF713Q8N859 430 aaPredicted RBP17.44■□□□□ 0.38
SFXN2-204ENST00000602287 TNPO1Q92973 898 aaKnown RBP17.44■□□□□ 0.38
SFXN2-204ENST00000602287 NECAB3Q96P71 396 aaPredicted RBP17.44■□□□□ 0.38
SFXN2-204ENST00000602287 C17orf80Q9BSJ5 609 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 LRRC2Q9BYS8 371 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 JADE2Q9NQC1 790 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 TUBE1Q9UJT0 475 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 TELO2Q9Y4R8 837 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 CNTNAP5Q8WYK1 1306 aa17.44■□□□□ 0.38
SFXN2-204ENST00000602287 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.43■□□□□ 0.38
SFXN2-204ENST00000602287 GSTTP1A0A1W2PQM5 241 aa17.43■□□□□ 0.38
SFXN2-204ENST00000602287 FOSP01100 380 aaPredicted RBP17.43■□□□□ 0.38
SFXN2-204ENST00000602287 COL9A3Q14050 684 aaPredicted RBP17.43■□□□□ 0.38
SFXN2-204ENST00000602287 GRIK4Q16099 956 aa17.43■□□□□ 0.38
SFXN2-204ENST00000602287 GLG1Q92896 1179 aa17.43■□□□□ 0.38
SFXN2-204ENST00000602287 MRPL38Q96DV4 380 aaKnown RBP17.43■□□□□ 0.38
SFXN2-204ENST00000602287 NEK1Q96PY6 1258 aa17.43■□□□□ 0.38
SFXN2-204ENST00000602287 C1QTNF1Q9BXJ1 281 aa17.43■□□□□ 0.38
SFXN2-204ENST00000602287 JPH1Q9HDC5 661 aaPredicted RBP17.43■□□□□ 0.38
SFXN2-204ENST00000602287 hCG_1642624A0A1W2PR95 340 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 MBLAC1A4D2B0 266 aaPredicted RBP17.42■□□□□ 0.38
SFXN2-204ENST00000602287 RRN3P2A6NIE6 340 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 CHRNA1P02708 482 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 COL9A1P20849 921 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 RCAN1P53805 252 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 NAPAP54920 295 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 EPC2Q52LR7 807 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 TIGD5Q53EQ6 642 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 RAB11FIP4Q86YS3 637 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 GLT8D2Q9H1C3 349 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 UBE2ZQ9H832 354 aaPredicted RBP17.42■□□□□ 0.38
SFXN2-204ENST00000602287 RIC8AQ9NPQ8 531 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 NFASCO94856 1347 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 TTC3P53804 2025 aa17.42■□□□□ 0.38
SFXN2-204ENST00000602287 LOXHD1Q8IVV2 1947 aa17.41■□□□□ 0.38
SFXN2-204ENST00000602287 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.41■□□□□ 0.38
SFXN2-204ENST00000602287 H3BNC9 293 aa17.41■□□□□ 0.38
SFXN2-204ENST00000602287 ZBTB43O43298 467 aa17.41■□□□□ 0.38
SFXN2-204ENST00000602287 UPP2O95045 317 aa17.41■□□□□ 0.38
SFXN2-204ENST00000602287 MARK3P27448 753 aa17.41■□□□□ 0.38
SFXN2-204ENST00000602287 MGAT3Q09327 533 aa17.41■□□□□ 0.38
SFXN2-204ENST00000602287 KRT32Q14532 448 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms