RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 KCNH7Q9NS40 1196 aa16.35■□□□□ 0.21
IRF3-224ENST00000599680 PDRG1Q9NUG6 133 aa16.35■□□□□ 0.21
IRF3-224ENST00000599680 IFNAR1P17181 557 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 SREBF1P36956 1147 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 THPOP40225 353 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 CLK2P49760 499 aaKnown RBP16.34■□□□□ 0.21
IRF3-224ENST00000599680 EVCP57679 992 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 SSRP1Q08945 709 aaKnown RBP16.34■□□□□ 0.21
IRF3-224ENST00000599680 STK3Q13188 491 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 CEP55Q53EZ4 464 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 SERINC5Q86VE9 423 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 SLC17A8Q8NDX2 589 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 SLC9A7Q96T83 725 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 ZMYND12Q9H0C1 365 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 RNPEPQ9H4A4 650 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 SLC28A3Q9HAS3 691 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 JPH1Q9HDC5 661 aaPredicted RBP16.34■□□□□ 0.21
IRF3-224ENST00000599680 SETD4Q9NVD3 440 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 SLC9A2Q9UBY0 812 aa16.34■□□□□ 0.21
IRF3-224ENST00000599680 BAIAP3O94812 1187 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 FOSL2P15408 326 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 ARHGAP4P98171 946 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 NTRK3Q16288 839 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 PKN1Q16512 942 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 ZNF618Q5T7W0 954 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 VWCEQ96DN2 955 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
IRF3-224ENST00000599680 NKX2-4Q9H2Z4 354 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 SMARCAD1Q9H4L7 1026 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 AZI2Q9H6S1 392 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 ERAP1Q9NZ08 941 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 TELO2Q9Y4R8 837 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 EMSYQ7Z589 1322 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 SIP14410 1827 aa16.33■□□□□ 0.2
IRF3-224ENST00000599680 GSTTP1A0A1W2PQM5 241 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 TREHO43280 583 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 NFASCO94856 1347 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 RABGGTBP53611 331 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 HIC1Q14526 733 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 TRIM71Q2Q1W2 868 aaKnown RBP16.32■□□□□ 0.2
IRF3-224ENST00000599680 CNKSR3Q6P9H4 555 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 PLA2G4DQ86XP0 818 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 CYP2W1Q8TAV3 490 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 NRCAMQ92823 1304 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 GAS2L1Q99501 681 aaPredicted RBP16.32■□□□□ 0.2
IRF3-224ENST00000599680 LARP6Q9BRS8 491 aaKnown RBP16.32■□□□□ 0.2
IRF3-224ENST00000599680 TCEAL9Q9UHQ7 104 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 PCDHA11Q9Y5I1 949 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 COL6A3P12111 3177 aa16.32■□□□□ 0.2
IRF3-224ENST00000599680 EVPLQ92817 2033 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 RSPH10B2B2RC85 870 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 KIF28PB7ZC32 967 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 RSPH10BP0C881 870 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 ARP10275 920 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 MARK3P27448 753 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 NLRP5P59047 1200 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 ANAPC15P60006 121 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 PPFIA1Q13136 1202 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 GRIN2CQ14957 1233 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 PPP2R2DQ66LE6 453 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 MAFAQ8NHW3 353 aaPredicted RBP16.31■□□□□ 0.2
IRF3-224ENST00000599680 LMBR1Q8WVP7 490 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 TNPO1Q92973 898 aaKnown RBP16.31■□□□□ 0.2
IRF3-224ENST00000599680 WNT8BQ93098 351 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 AGO4Q9HCK5 861 aaKnown RBP16.31■□□□□ 0.2
IRF3-224ENST00000599680 SH3GLB2Q9NR46 395 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
IRF3-224ENST00000599680 CHD9Q3L8U1 2897 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 DDX39AO00148 427 aaKnown RBP16.3■□□□□ 0.2
IRF3-224ENST00000599680 MEIS1O00470 390 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 NBNO60934 754 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 EFCAB14O75071 495 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 CAND2O75155 1236 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 CDKL5O76039 1030 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 DEXIO95424 95 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 CXCL10P02778 98 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 CTSHP09668 335 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 HOXC8P31273 242 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 ACTR2P61160 394 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
IRF3-224ENST00000599680 IKBKEQ14164 716 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 PHOSPHO2Q8TCD6 241 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 ZBED2Q9BTP6 218 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 TRPC6Q9Y210 931 aa16.3■□□□□ 0.2
IRF3-224ENST00000599680 YBX2Q9Y2T7 364 aaKnown RBP16.3■□□□□ 0.2
IRF3-224ENST00000599680 LGR5O75473 907 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 CYP3A4P08684 503 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 WDR5P61964 334 aaKnown RBP16.29■□□□□ 0.2
IRF3-224ENST00000599680 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 GRIK4Q16099 956 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 RSPH3Q86UC2 560 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 ZNF577Q9BSK1 485 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 SLKQ9H2G2 1235 aaPredicted RBP16.29■□□□□ 0.2
IRF3-224ENST00000599680 PRDM12Q9H4Q4 367 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 TUBE1Q9UJT0 475 aa16.29■□□□□ 0.2
IRF3-224ENST00000599680 ABHD14A-ACY1A0A1B0GW23 586 aa16.28■□□□□ 0.2
IRF3-224ENST00000599680 FAM86B1E9PN63 330 aa16.28■□□□□ 0.2
IRF3-224ENST00000599680 IPO5O00410 1097 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms