RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 RTP1P59025 263 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 PSMC6P62333 389 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 LRCH2Q5VUJ6 765 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 NFRKBQ6P4R8 1299 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 ABHD15Q6UXT9 468 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 ANKRD33Q7Z3H0 272 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 BRAPQ7Z569 592 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 POTEDQ86YR6 584 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 TEKT3Q9BXF9 490 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 EMSYQ7Z589 1322 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 PDE4DIPQ5VU43 2346 aa22.98■■□□□ 1.27
PNKP-211ENST00000598020 DDX39AO00148 427 aaKnown RBP22.97■■□□□ 1.27
PNKP-211ENST00000598020 STX6O43752 255 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 NEMFO60524 1076 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 ZNF286BP0CG31 522 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 PSEN2P49810 448 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 PTPN11Q06124 597 aaPredicted RBP22.97■■□□□ 1.27
PNKP-211ENST00000598020 NBPF20Q3BBV1 942 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 RILPL1Q5EBL4 403 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 TTC38Q5R3I4 469 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 SESTD1Q86VW0 696 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 SLFN12Q8IYM2 578 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 MTMR9Q96QG7 549 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 UIMC1Q96RL1 719 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 TCEAL9Q9UHQ7 104 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 MTMR6Q9Y217 621 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 MROH7Q68CQ1 1323 aa22.97■■□□□ 1.27
PNKP-211ENST00000598020 VPS37CA5D8V6 355 aaPredicted RBP22.96■■□□□ 1.27
PNKP-211ENST00000598020 H3BRB1 525 aa22.96■■□□□ 1.27
PNKP-211ENST00000598020 BAG4O95429 457 aaKnown RBP22.96■■□□□ 1.27
PNKP-211ENST00000598020 ATP2B1P20020 1258 aa22.96■■□□□ 1.27
PNKP-211ENST00000598020 MFSD10Q14728 455 aa22.96■■□□□ 1.27
PNKP-211ENST00000598020 TRIM60Q495X7 471 aa22.96■■□□□ 1.27
PNKP-211ENST00000598020 RDM1Q8NG50 284 aa22.96■■□□□ 1.27
PNKP-211ENST00000598020 PCYT2Q99447 389 aa22.96■■□□□ 1.27
PNKP-211ENST00000598020 SMARCAD1Q9H4L7 1026 aa22.96■■□□□ 1.27
PNKP-211ENST00000598020 TUT1Q9H6E5 874 aaKnown RBP22.96■■□□□ 1.27
PNKP-211ENST00000598020 ZNF215Q9UL58 517 aaPredicted RBP22.96■■□□□ 1.27
PNKP-211ENST00000598020 WDR64B1ANS9 1081 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 SUPT20HL2P0C7V6 817 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 SFNP31947 248 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 PPP2R5CQ13362 524 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 CALCRLQ16602 461 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 KIAA0753Q2KHM9 967 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 UTP14CQ5TAP6 766 aaKnown RBP22.95■■□□□ 1.26
PNKP-211ENST00000598020 MIS18BP1Q6P0N0 1132 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 PLPPR4Q7Z2D5 763 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 AFAP1L1Q8TED9 768 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 DPF3Q92784 378 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 GJA10Q969M2 543 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 VAV3Q9UKW4 847 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 PCDHA10Q9Y5I2 948 aa22.95■■□□□ 1.26
PNKP-211ENST00000598020 EVI5O60447 810 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 MCM7P33993 719 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 JAK3P52333 1124 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 TLE2Q04725 743 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 ZNF174Q15697 407 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 FAM126BQ8IXS8 530 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 UNC45AQ9H3U1 944 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 AZI2Q9H6S1 392 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 DISC1Q9NRI5 854 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 ERAP1Q9NZ08 941 aa22.94■■□□□ 1.26
PNKP-211ENST00000598020 WDR81Q562E7 1941 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 MARCH6O60337 910 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 PSAPP07602 524 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 SLC26A2P50443 739 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 STAT5BP51692 787 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 TRIM50Q86XT4 487 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 C4orf32Q8N8J7 132 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 TMEM60Q9H2L4 133 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.93■■□□□ 1.26
PNKP-211ENST00000598020 ATP11BQ9Y2G3 1177 aa22.93■■□□□ 1.26
PNKP-211ENST00000598020 DCDC2CA8MYV0 355 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 CD4P01730 458 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 SPIRE1Q08AE8 756 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 RESTQ13127 1097 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 FAM160B1Q5W0V3 765 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 FERMT3Q86UX7 667 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 GLG1Q92896 1179 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 ZSCAN16Q9H4T2 348 aaPredicted RBP22.92■■□□□ 1.26
PNKP-211ENST00000598020 PCDHA12Q9UN75 941 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 PCDHB6Q9Y5E3 794 aa22.92■■□□□ 1.26
PNKP-211ENST00000598020 MAFBQ9Y5Q3 323 aaPredicted RBP22.92■■□□□ 1.26
PNKP-211ENST00000598020 MYH9P35579 1960 aaKnown RBP22.92■■□□□ 1.26
PNKP-211ENST00000598020 LAD1O00515 517 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 PQBP1O60828 265 aaKnown RBP22.91■■□□□ 1.26
PNKP-211ENST00000598020 HOXC8P31273 242 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 NBR1Q14596 966 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 MIER3Q7Z3K6 550 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 CCDC60Q8IWA6 550 aaPredicted RBP22.91■■□□□ 1.26
PNKP-211ENST00000598020 C7orf31Q8N865 590 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 SPRYD3Q8NCJ5 442 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 ZNF302Q9NR11 478 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 HDAC6Q9UBN7 1215 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 GTF2IRD1Q9UHL9 959 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 NR2E3Q9Y5X4 410 aa22.91■■□□□ 1.26
PNKP-211ENST00000598020 TLR3O15455 904 aaKnown RBP22.9■■□□□ 1.26
PNKP-211ENST00000598020 OR52Z1P0C646 297 aa22.9■■□□□ 1.26
PNKP-211ENST00000598020 FAAP100Q0VG06 881 aa22.9■■□□□ 1.26
PNKP-211ENST00000598020 FAM47CQ5HY64 1035 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms