RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 XBP1P17861 261 aa23.98■■□□□ 1.43
PNKP-209ENST00000596726 TMEM240Q5SV17 173 aa23.98■■□□□ 1.43
PNKP-209ENST00000596726 WASF1Q92558 559 aa23.98■■□□□ 1.43
PNKP-209ENST00000596726 DHX38Q92620 1227 aaKnown RBP23.98■■□□□ 1.43
PNKP-209ENST00000596726 VWCEQ96DN2 955 aa23.98■■□□□ 1.43
PNKP-209ENST00000596726 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.98■■□□□ 1.432e-8■■■■□ 21.5
PNKP-209ENST00000596726 IL23AQ9NPF7 189 aa23.98■■□□□ 1.43
PNKP-209ENST00000596726 GJB4Q9NTQ9 266 aa23.98■■□□□ 1.43
PNKP-209ENST00000596726 ZNF215Q9UL58 517 aaPredicted RBP23.98■■□□□ 1.43
PNKP-209ENST00000596726 SZT2Q5T011 3432 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 LGR5O75473 907 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 SMIM10L2AP0DMW4 78 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 SMIM10L2BP0DMW5 78 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 ZNF200P98182 395 aaPredicted RBP23.97■■□□□ 1.43
PNKP-209ENST00000596726 SETQ01105 290 aaPredicted RBP23.97■■□□□ 1.43
PNKP-209ENST00000596726 RBL2Q08999 1139 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 BFSP2Q13515 415 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 CAGE1Q8TC20 777 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 TBCKQ8TEA7 893 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 LENG9Q96B70 501 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 RNPEPQ9H4A4 650 aa23.97■■□□□ 1.43
PNKP-209ENST00000596726 EMSYQ7Z589 1322 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 IPO5O00410 1097 aaKnown RBP23.96■■□□□ 1.43
PNKP-209ENST00000596726 JAK2O60674 1132 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 ATG7O95352 703 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 ACRP10323 421 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 ACTR2P61160 394 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 PTK7Q13308 1070 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 SCLYQ96I15 445 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 LRCH3Q96II8 777 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 ZSCAN31Q96LW9 406 aaPredicted RBP23.96■■□□□ 1.43
PNKP-209ENST00000596726 PCYT2Q99447 389 aa23.96■■□□□ 1.43
PNKP-209ENST00000596726 IQCF3P0C7M6 154 aa23.95■■□□□ 1.42
PNKP-209ENST00000596726 RABEP1Q15276 862 aa23.95■■□□□ 1.42
PNKP-209ENST00000596726 TRIM71Q2Q1W2 868 aaKnown RBP23.95■■□□□ 1.42
PNKP-209ENST00000596726 PRR16Q569H4 304 aa23.95■■□□□ 1.42
PNKP-209ENST00000596726 KRT25Q7Z3Z0 450 aa23.95■■□□□ 1.42
PNKP-209ENST00000596726 CCDC155Q8N6L0 562 aa23.95■■□□□ 1.42
PNKP-209ENST00000596726 RETREG2Q8NC44 543 aa23.95■■□□□ 1.42
PNKP-209ENST00000596726 SMARCAD1Q9H4L7 1026 aa23.95■■□□□ 1.42
PNKP-209ENST00000596726 UPF2Q9HAU5 1272 aaKnown RBP23.95■■□□□ 1.42
PNKP-209ENST00000596726 CYP3A7-CYP3A51PA0A087WV96 503 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 C17orf102A2RUQ5 167 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 CCNE2O96020 404 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 CYP3A7P24462 503 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 ADAM17P78536 824 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 RASIP1Q5U651 963 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 PSRC1Q6PGN9 363 aaPredicted RBP23.94■■□□□ 1.42
PNKP-209ENST00000596726 ZNF365Q70YC5 407 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 SERINC5Q86VE9 423 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 RPUSD2Q8IZ73 545 aaKnown RBP23.94■■□□□ 1.42
PNKP-209ENST00000596726 TET1Q8NFU7 2136 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 AFAP1L1Q8TED9 768 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 WNT8BQ93098 351 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 RNPC3Q96LT9 517 aaKnown RBP23.94■■□□□ 1.42
PNKP-209ENST00000596726 ZNF577Q9BSK1 485 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 ERAP1Q9NZ08 941 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 WDR81Q562E7 1941 aa23.94■■□□□ 1.42
PNKP-209ENST00000596726 IGKV6D-21A0A0A0MT36 114 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 SLC34A2O95436 690 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 RFC2P35250 354 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 NONOQ15233 471 aaKnown RBP eCLIP23.93■■□□□ 1.42
PNKP-209ENST00000596726 GPR153Q6NV75 609 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 IL27Q8NEV9 243 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 OXER1Q8TDS5 423 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 GLG1Q92896 1179 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 ATP6V0A1Q93050 837 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 MBOAT7Q96N66 472 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 SH2B1Q9NRF2 756 aaPredicted RBP23.93■■□□□ 1.42
PNKP-209ENST00000596726 TBC1D22BQ9NU19 505 aa23.93■■□□□ 1.42
PNKP-209ENST00000596726 TREHO43280 583 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 CKBP12277 381 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 Q4G0T1 1027 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 MOXD1Q6UVY6 613 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 ABHD15Q6UXT9 468 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 PLPPR4Q7Z2D5 763 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 CCDC83Q8IWF9 413 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 HERVK_113Q902F9 699 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 TBC1D32Q96NH3 1257 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 UIMC1Q96RL1 719 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 LLPHQ9BRT6 129 aaKnown RBP23.92■■□□□ 1.42
PNKP-209ENST00000596726 SETD4Q9NVD3 440 aa23.92■■□□□ 1.42
PNKP-209ENST00000596726 MYH9P35579 1960 aaKnown RBP23.92■■□□□ 1.42
PNKP-209ENST00000596726 NRCAMQ92823 1304 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 DDX39AO00148 427 aaKnown RBP23.91■■□□□ 1.42
PNKP-209ENST00000596726 MSH4O15457 936 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 FGBP02675 491 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 PFKMP08237 780 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 GNAT1P11488 350 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 SELPP16109 830 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 INF2Q27J81 1249 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 LMBR1Q8WVP7 490 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 GTF3C3Q9Y5Q9 886 aa23.91■■□□□ 1.42
PNKP-209ENST00000596726 CCDC194A0A1B0GVG4 234 aa23.9■■□□□ 1.42
PNKP-209ENST00000596726 TDP2O95551 362 aa23.9■■□□□ 1.42
PNKP-209ENST00000596726 MARK3P27448 753 aa23.9■■□□□ 1.42
PNKP-209ENST00000596726 STAT5BP51692 787 aa23.9■■□□□ 1.42
PNKP-209ENST00000596726 GPNMBQ14956 572 aa23.9■■□□□ 1.42
PNKP-209ENST00000596726 ZNF746Q6NUN9 644 aaPredicted RBP23.9■■□□□ 1.42
PNKP-209ENST00000596726 TRAF7Q6Q0C0 670 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms