RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 GTF2IRD1Q9UHL9 959 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 ZNF215Q9UL58 517 aaPredicted RBP20.7■□□□□ 0.9
ZNF558-204ENST00000596172 KIF3AQ9Y496 699 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 MYH7BA7E2Y1 1941 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 BTBD18B2RXH4 712 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 MSH4O15457 936 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 LGR5O75473 907 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 RAG1P15918 1043 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 ACTR2P61160 394 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 CHRDL2Q6WN34 429 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 SLC5A5Q92911 643 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 SMARCAD1Q9H4L7 1026 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 HDAC6Q9UBN7 1215 aa20.69■□□□□ 0.9
ZNF558-204ENST00000596172 TDP2O95551 362 aa20.68■□□□□ 0.9
ZNF558-204ENST00000596172 CCNE2O96020 404 aa20.68■□□□□ 0.9
ZNF558-204ENST00000596172 ITGB8P26012 769 aa20.68■□□□□ 0.9
ZNF558-204ENST00000596172 HOXC8P31273 242 aa20.68■□□□□ 0.9
ZNF558-204ENST00000596172 CHMP4BP1P59074 171 aa20.68■□□□□ 0.9
ZNF558-204ENST00000596172 EARS2Q5JPH6 523 aaKnown RBP20.68■□□□□ 0.9
ZNF558-204ENST00000596172 UTP14CQ5TAP6 766 aaKnown RBP20.68■□□□□ 0.9
ZNF558-204ENST00000596172 GDF6Q6KF10 455 aaPredicted RBP20.68■□□□□ 0.9
ZNF558-204ENST00000596172 ZNF746Q6NUN9 644 aaPredicted RBP20.68■□□□□ 0.9
ZNF558-204ENST00000596172 ERAP1Q9NZ08 941 aa20.68■□□□□ 0.9
ZNF558-204ENST00000596172 COLQQ9Y215 455 aaPredicted RBP20.68■□□□□ 0.9
ZNF558-204ENST00000596172 EMSYQ7Z589 1322 aa20.68■□□□□ 0.9
ZNF558-204ENST00000596172 IGKV6D-21A0A0A0MT36 114 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 A0A1W2PPC1 479 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 MDM2Q00987 491 aaPredicted RBP20.67■□□□□ 0.9
ZNF558-204ENST00000596172 KRT76Q01546 638 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 CUL4AQ13619 759 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 PTGISQ16647 500 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 LETM2Q2VYF4 491 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 MFSD5Q6N075 450 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 ABHD15Q6UXT9 468 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 PLPPR4Q7Z2D5 763 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 TRIM50Q86XT4 487 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 SMAP1Q8IYB5 467 aaPredicted RBP20.67■□□□□ 0.9
ZNF558-204ENST00000596172 BADQ92934 168 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 CTAGE1Q96RT6 745 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 PCYT2Q99447 389 aa20.67■□□□□ 0.9
ZNF558-204ENST00000596172 NOC4LQ9BVI4 516 aaKnown RBP20.67■□□□□ 0.9
ZNF558-204ENST00000596172 FOXP1Q9H334 677 aaPredicted RBP20.67■□□□□ 0.9
ZNF558-204ENST00000596172 DDX25Q9UHL0 483 aaKnown RBP20.67■□□□□ 0.9
ZNF558-204ENST00000596172 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.67■□□□□ 0.9
ZNF558-204ENST00000596172 RANBP2P49792 3224 aaKnown RBP20.66■□□□□ 0.9
ZNF558-204ENST00000596172 FOSBP53539 338 aa20.66■□□□□ 0.9
ZNF558-204ENST00000596172 ETNPPLQ8TBG4 499 aa20.66■□□□□ 0.9
ZNF558-204ENST00000596172 PPP1R13LQ8WUF5 828 aa20.66■□□□□ 0.9
ZNF558-204ENST00000596172 GLG1Q92896 1179 aa20.66■□□□□ 0.9
ZNF558-204ENST00000596172 HIPK3Q9H422 1215 aa20.66■□□□□ 0.9
ZNF558-204ENST00000596172 AZI2Q9H6S1 392 aa20.66■□□□□ 0.9
ZNF558-204ENST00000596172 TBX3O15119 743 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 PSMD10O75832 226 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 SMIM10L2AP0DMW4 78 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 SMIM10L2BP0DMW5 78 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 GNAT1P11488 350 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 SLC26A2P50443 739 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 GUCY1B3Q02153 619 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 AFAP1L1Q8TED9 768 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 TNPO1Q92973 898 aaKnown RBP20.65■□□□□ 0.9
ZNF558-204ENST00000596172 FAM20AQ96MK3 541 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 UBE2OQ9C0C9 1292 aaKnown RBP20.65■□□□□ 0.9
ZNF558-204ENST00000596172 RNPEPQ9H4A4 650 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 TCEAL9Q9UHQ7 104 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 NOD1Q9Y239 953 aa20.65■□□□□ 0.9
ZNF558-204ENST00000596172 NRCAMQ92823 1304 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 C17orf102A2RUQ5 167 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 FAM205CA6NFA0 338 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 DDX39AO00148 427 aaKnown RBP20.64■□□□□ 0.89
ZNF558-204ENST00000596172 PITPNM1O00562 1244 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 SLC37A4O43826 429 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 CCNT1O60563 726 aaKnown RBP20.64■□□□□ 0.89
ZNF558-204ENST00000596172 GAS7O60861 476 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 CYP2C9P11712 490 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 STAT5BP51692 787 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 PTK7Q13308 1070 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 LRCH2Q5VUJ6 765 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 MIS18BP1Q6P0N0 1132 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 B3GNT9Q6UX72 402 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 TMEM199Q8N511 208 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 TEKT3Q9BXF9 490 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 KCNMB3Q9NPA1 279 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 SMC3Q9UQE7 1217 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 PCDHA10Q9Y5I2 948 aa20.64■□□□□ 0.89
ZNF558-204ENST00000596172 U2AF2P26368 475 aaKnown RBP eCLIP20.63■□□□□ 0.89
ZNF558-204ENST00000596172 GJB2P29033 226 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 SFNP31947 248 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 CYP2C18P33260 490 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 ADAM17P78536 824 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 FPGSQ05932 587 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 RBL2Q08999 1139 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 BFSP2Q13515 415 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 HIC1Q14526 733 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 FAM160B1Q5W0V3 765 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 CCDC155Q8N6L0 562 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 RDM1Q8NG50 284 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 CAGE1Q8TC20 777 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 SNX21Q969T3 373 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 UIMC1Q96RL1 719 aa20.63■□□□□ 0.89
ZNF558-204ENST00000596172 PPP1R12CQ9BZL4 782 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms