RNA–Protein interactions for RNA: ENST00000595358.5

CCDC61-204, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC61, Length 1,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-204ENST00000595358 UBASH3AP57075 661 aa28.18■■■□□ 2.1
CCDC61-204ENST00000595358 CDKAL1Q5VV42 579 aa28.18■■■□□ 2.1
CCDC61-204ENST00000595358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.18■■■□□ 2.1
CCDC61-204ENST00000595358 NLRX1Q86UT6 975 aa28.18■■■□□ 2.1
CCDC61-204ENST00000595358 LOXHD1Q8IVV2 1947 aa28.18■■■□□ 2.1
CCDC61-204ENST00000595358 DDX39AO00148 427 aaKnown RBP28.18■■■□□ 2.1
CCDC61-204ENST00000595358 COPB2P35606 906 aa28.18■■■□□ 2.1
CCDC61-204ENST00000595358 CBFA2T2O43439 604 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 ATP9AO75110 1047 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 CETPP11597 493 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 ERCC3P19447 782 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 CDK11BP21127 795 aaKnown RBP28.17■■■□□ 2.1
CCDC61-204ENST00000595358 GTF2A2P52657 109 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 HSP90AA4PQ58FG1 418 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 MIER3Q7Z3K6 550 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 HPS3Q969F9 1004 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 SLC39A2Q9NP94 309 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 PANK4Q9NVE7 773 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 PNMA3Q9UL41 463 aa28.17■■■□□ 2.1
CCDC61-204ENST00000595358 RGS20O76081 388 aa28.16■■■□□ 2.1
CCDC61-204ENST00000595358 TPM3P06753 285 aa28.16■■■□□ 2.1
CCDC61-204ENST00000595358 CNTN2Q02246 1040 aa28.16■■■□□ 2.1
CCDC61-204ENST00000595358 COASYQ13057 564 aa28.16■■■□□ 2.1
CCDC61-204ENST00000595358 TPD52L1Q16890 204 aaPredicted RBP28.16■■■□□ 2.1
CCDC61-204ENST00000595358 BHMT2Q9H2M3 363 aa28.16■■■□□ 2.1
CCDC61-204ENST00000595358 SLC45A1Q9Y2W3 748 aa28.16■■■□□ 2.1
CCDC61-204ENST00000595358 FRMD3A2A2Y4 597 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 Q3C1V9 767 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 ZSCAN30Q86W11 494 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 CCDC65Q8IXS2 484 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 ASTN1O14525 1302 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 ESPNB1AK53 854 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 COBLO75128 1261 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 PMS1P54277 932 aaKnown RBP28.15■■■□□ 2.1
CCDC61-204ENST00000595358 GTF3C2Q8WUA4 911 aaPredicted RBP28.15■■■□□ 2.1
CCDC61-204ENST00000595358 CDHR1Q96JP9 859 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 NACC1Q96RE7 527 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 LXNQ9BS40 222 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 WRAP73Q9P2S5 460 aaPredicted RBP28.15■■■□□ 2.1
CCDC61-204ENST00000595358 NRBP1Q9UHY1 535 aa28.15■■■□□ 2.1
CCDC61-204ENST00000595358 NPHP3-ACAD11A0A0J9YXS1 232 aa28.14■■■□□ 2.1
CCDC61-204ENST00000595358 P4HBP07237 508 aaKnown RBP28.14■■■□□ 2.1
CCDC61-204ENST00000595358 PIGOQ8TEQ8 1089 aa28.14■■■□□ 2.1
CCDC61-204ENST00000595358 NAP1L5Q96NT1 182 aaPredicted RBP28.14■■■□□ 2.1
CCDC61-204ENST00000595358 TRPM7Q96QT4 1865 aa28.14■■■□□ 2.1
CCDC61-204ENST00000595358 TRIM49BA6NDI0 452 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 CCNE1P24864 410 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 ALDH5A1P51649 535 aaPredicted RBP28.13■■■□□ 2.09
CCDC61-204ENST00000595358 GIT2Q14161 759 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 TTI2Q6NXR4 508 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 P2RX5Q93086 422 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 ZKSCAN5Q9Y2L8 839 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 POTEB2H3BUK9 544 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 ITGBL1O95965 494 aaPredicted RBP28.13■■■□□ 2.09
CCDC61-204ENST00000595358 KRT18P05783 430 aaKnown RBP28.13■■■□□ 2.09
CCDC61-204ENST00000595358 KRT76Q01546 638 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 STXBP2Q15833 593 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 CST9Q5W186 159 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 CCDC186Q7Z3E2 898 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 GUF1Q8N442 669 aaKnown RBP28.13■■■□□ 2.09
CCDC61-204ENST00000595358 FAM133AQ8N9E0 248 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 BANK1Q8NDB2 785 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 R3HDMLQ9H3Y0 253 aa28.13■■■□□ 2.09
CCDC61-204ENST00000595358 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.13■■■□□ 2.09
CCDC61-204ENST00000595358 CCL15-CCL14A0A0B4J2E2 113 aa28.12■■■□□ 2.09
CCDC61-204ENST00000595358 BICDL2A1A5D9 508 aa28.12■■■□□ 2.09
CCDC61-204ENST00000595358 ZBTB48P10074 688 aaPredicted RBP28.12■■■□□ 2.09
CCDC61-204ENST00000595358 KCNA2P16389 499 aa28.12■■■□□ 2.09
CCDC61-204ENST00000595358 CCL15Q16663 113 aa28.12■■■□□ 2.09
CCDC61-204ENST00000595358 GNPTABQ3T906 1256 aa28.12■■■□□ 2.09
CCDC61-204ENST00000595358 SPRYD7Q5W111 196 aa28.12■■■□□ 2.09
CCDC61-204ENST00000595358 APTXQ7Z2E3 356 aaKnown RBP28.12■■■□□ 2.09
CCDC61-204ENST00000595358 ADD3Q9UEY8 706 aaKnown RBP28.12■■■□□ 2.09
CCDC61-204ENST00000595358 PCDHA2Q9Y5H9 948 aa28.12■■■□□ 2.09
CCDC61-204ENST00000595358 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.12■■■□□ 2.09
CCDC61-204ENST00000595358 WDR81Q562E7 1941 aa28.12■■■□□ 2.09
CCDC61-204ENST00000595358 BTBD19C9JJ37 291 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 EIF3JO75822 258 aaKnown RBP28.11■■■□□ 2.09
CCDC61-204ENST00000595358 CYP2C8P10632 490 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 SFNP31947 248 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 JAK3P52333 1124 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 ERVK-9P63128 1117 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 ERVK-24P63145 666 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 CCDC144BQ3MJ40 725 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 FAM26FQ5R3K3 315 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 CENPPQ6IPU0 288 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 RINT1Q6NUQ1 792 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 BRI3BPQ8WY22 251 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 SENP7Q9BQF6 1050 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 REEP2Q9BRK0 252 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 ZSWIM4Q9H7M6 989 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 ZNFX1Q9P2E3 1918 aaKnown RBP28.11■■■□□ 2.09
CCDC61-204ENST00000595358 NFASCO94856 1347 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 DCAF8L1A6NGE4 600 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 SPATA31C2B4DYI2 1134 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 PDHXO00330 501 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 ZBTB39O15060 712 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 PTGS1P23219 599 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 EDNRBP24530 442 aa28.11■■■□□ 2.09
CCDC61-204ENST00000595358 CACNB1Q02641 598 aaPredicted RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms