RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 INSL6Q9Y581 213 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 NOP56O00567 594 aaKnown RBP12.29□□□□□ -0.44
USE1-203ENST00000593597 SLC27A2O14975 620 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 CHRNA1P02708 482 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 AMHP03971 560 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 GNPTABQ3T906 1256 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 MARCH8Q5T0T0 291 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 TYW1BQ6NUM6 668 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 FBXO22Q8NEZ5 403 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.29□□□□□ -0.44
USE1-203ENST00000593597 SMARCC2Q8TAQ2 1214 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 TOP1MTQ969P6 601 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 PCYT2Q99447 389 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 SENP7Q9BQF6 1050 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 USP26Q9BXU7 913 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 UBE2ZQ9H832 354 aaPredicted RBP12.29□□□□□ -0.44
USE1-203ENST00000593597 UBIAD1Q9Y5Z9 338 aa12.29□□□□□ -0.44
USE1-203ENST00000593597 FNDC1Q4ZHG4 1894 aaPredicted RBP12.28□□□□□ -0.44
USE1-203ENST00000593597 CAND2O75155 1236 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 SMARCA1P28370 1054 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 TCF7P36402 384 aaPredicted RBP12.28□□□□□ -0.44
USE1-203ENST00000593597 TRAF1Q13077 416 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 SART3Q15020 963 aaKnown RBP12.28□□□□□ -0.44
USE1-203ENST00000593597 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 EPC2Q52LR7 807 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
USE1-203ENST00000593597 LINC01599Q8WXQ3 324 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 SEPT8Q92599 483 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 RRP36Q96EU6 259 aaKnown RBP12.28□□□□□ -0.44
USE1-203ENST00000593597 ESYT1Q9BSJ8 1104 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 CNTNAP5Q8WYK1 1306 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 EVPLQ92817 2033 aa12.28□□□□□ -0.44
USE1-203ENST00000593597 UPP2O95045 317 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 GHRP10912 638 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 IL9P15248 144 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 LPIN1Q14693 890 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 CREB3L3Q68CJ9 461 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 XRRA1Q6P2D8 792 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 TMTC3Q6ZXV5 915 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 MTA3Q9BTC8 594 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 LRFN3Q9BTN0 628 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.45
USE1-203ENST00000593597 WDFY4Q6ZS81 3184 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 MBLAC1A4D2B0 266 aaPredicted RBP12.26□□□□□ -0.45
USE1-203ENST00000593597 H3BNC9 293 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 ADAMTS3O15072 1205 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 MARK3P27448 753 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 LIFRP42702 1097 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 FUT2Q10981 343 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 COL19A1Q14993 1142 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 LEXMQ3ZCV2 418 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 WWC2Q6AWC2 1192 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 RPAINQ86UA6 219 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 CYP2W1Q8TAV3 490 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 MRPL38Q96DV4 380 aaKnown RBP12.26□□□□□ -0.45
USE1-203ENST00000593597 PGBD1Q96JS3 809 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 TMEM87BQ96K49 555 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 YME1L1Q96TA2 773 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 IFIH1Q9BYX4 1025 aaKnown RBP12.26□□□□□ -0.45
USE1-203ENST00000593597 PSTPIP2Q9H939 334 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 ZNF215Q9UL58 517 aaPredicted RBP12.26□□□□□ -0.45
USE1-203ENST00000593597 NRCAMQ92823 1304 aa12.26□□□□□ -0.45
USE1-203ENST00000593597 FAM86C2PA6NEL3 165 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 KCNA5P22460 613 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 KIF5BP33176 963 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 MCM5P33992 734 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 GRIK4Q16099 956 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 TCEAL5Q5H9L2 206 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 FBXO47Q5MNV8 452 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 CASC1Q6TDU7 716 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 NLRX1Q86UT6 975 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 SGMS1Q86VZ5 419 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 FAM178BQ8IXR5 827 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 TMEM192Q8IY95 271 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 CRIPAKQ8N1N5 446 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 NEK9Q8TD19 979 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 DNAJB3Q8WWF6 145 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 CUL5Q93034 780 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 TCEANC2Q96MN5 208 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 LZTS2Q9BRK4 669 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
USE1-203ENST00000593597 JADE2Q9NQC1 790 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 SEC63Q9UGP8 760 aaKnown RBP12.25□□□□□ -0.45
USE1-203ENST00000593597 BRPF3Q9ULD4 1205 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 PCDHA6Q9UN73 950 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 PCDHA8Q9Y5H6 950 aa12.25□□□□□ -0.45
USE1-203ENST00000593597 MYH9P35579 1960 aaKnown RBP12.25□□□□□ -0.45
USE1-203ENST00000593597 CCDC69A6NI79 296 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 H3BQ06 376 aaPredicted RBP12.24□□□□□ -0.45
USE1-203ENST00000593597 GNAT1P11488 350 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 PLA2G5P39877 138 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 PPFIA1Q13136 1202 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 ITGB3BPQ13352 177 aaPredicted RBP12.24□□□□□ -0.45
USE1-203ENST00000593597 GPM6BQ13491 265 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 MTMR1Q13613 665 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 MUC6Q6W4X9 2439 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms