RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 LGALS2P05162 132 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 CDK7P50613 346 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 KRT76Q01546 638 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 RESTQ13127 1097 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 ITGA7Q13683 1181 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 SNX17Q15036 470 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 UTP14CQ5TAP6 766 aaKnown RBP11.24□□□□□ -0.61
TPM4-216ENST00000592822 ZNF746Q6NUN9 644 aaPredicted RBP11.24□□□□□ -0.61
TPM4-216ENST00000592822 B3GNT9Q6UX72 402 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 ABHD15Q6UXT9 468 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 TRIM50Q86XT4 487 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 SLC43A3Q8NBI5 491 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 PPP1R13LQ8WUF5 828 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 VTI1AQ96AJ9 217 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 MTMR9Q96QG7 549 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 PCYT2Q99447 389 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 TEKT3Q9BXF9 490 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 UNC45AQ9H3U1 944 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 PCDHB6Q9Y5E3 794 aa11.24□□□□□ -0.61
TPM4-216ENST00000592822 IGKV6D-21A0A0A0MT36 114 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
TPM4-216ENST00000592822 ARVCFO00192 962 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 HAS3O00219 553 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 LGR5O75473 907 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 SUPT20HL2P0C7V6 817 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 PSEN2P49810 448 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 ORC2Q13416 577 aaPredicted RBP11.23□□□□□ -0.61
TPM4-216ENST00000592822 PKP1Q13835 747 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 MFSD10Q14728 455 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 CALCRLQ16602 461 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 NBPF20Q3BBV1 942 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 TRIM60Q495X7 471 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 RILPL1Q5EBL4 403 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 C4orf32Q8N8J7 132 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 HTATIP2Q9BUP3 242 aa11.23□□□□□ -0.61
TPM4-216ENST00000592822 H3BRB1 525 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 CHMP2AO43633 222 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 MARCH6O60337 910 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 BAG4O95429 457 aaKnown RBP11.22□□□□□ -0.61
TPM4-216ENST00000592822 MYH9P35579 1960 aaKnown RBP11.22□□□□□ -0.61
TPM4-216ENST00000592822 TXKP42681 527 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 RTP1P59025 263 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 CHMP4BP1P59074 171 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 TLE2Q04725 743 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 SPIRE1Q08AE8 756 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 PPP2R5CQ13362 524 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 KIAA0753Q2KHM9 967 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 MIS18BP1Q6P0N0 1132 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 FAM173BQ6P4H8 233 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 EMSYQ7Z589 1322 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 SMAP1Q8IYB5 467 aaPredicted RBP11.22□□□□□ -0.61
TPM4-216ENST00000592822 SLFN12Q8IYM2 578 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 SMARCAD1Q9H4L7 1026 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 TUT1Q9H6E5 874 aaKnown RBP11.22□□□□□ -0.61
TPM4-216ENST00000592822 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.22□□□□□ -0.61
TPM4-216ENST00000592822 DISC1Q9NRI5 854 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 MYH15Q9Y2K3 1946 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 PCDHA10Q9Y5I2 948 aa11.22□□□□□ -0.61
TPM4-216ENST00000592822 WDR64B1ANS9 1081 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 EML1O00423 815 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 PSAPP07602 524 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 OR52Z1P0C646 297 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 ZSCAN22P10073 491 aaPredicted RBP11.21□□□□□ -0.61
TPM4-216ENST00000592822 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
TPM4-216ENST00000592822 SFNP31947 248 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 STAT5BP51692 787 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 PTGDRQ13258 359 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
TPM4-216ENST00000592822 SWSAP1Q6NVH7 229 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 NFRKBQ6P4R8 1299 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 PLPPR4Q7Z2D5 763 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 ANKRD33Q7Z3H0 272 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 MIER3Q7Z3K6 550 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 SESTD1Q86VW0 696 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.61
TPM4-216ENST00000592822 RDM1Q8NG50 284 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 FOXD4L4Q8WXT5 416 aaPredicted RBP11.21□□□□□ -0.61
TPM4-216ENST00000592822 GLG1Q92896 1179 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 KATNAL1Q9BW62 490 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 RNPEPQ9H4A4 650 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 TTC12Q9H892 705 aaPredicted RBP11.21□□□□□ -0.61
TPM4-216ENST00000592822 TCEAL9Q9UHQ7 104 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 PCDHA12Q9UN75 941 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 ATP11BQ9Y2G3 1177 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 SAMM50Q9Y512 469 aa11.21□□□□□ -0.61
TPM4-216ENST00000592822 TRIP12Q14669 1992 aaPredicted RBP11.21□□□□□ -0.62
TPM4-216ENST00000592822 BACH1O14867 736 aa11.2□□□□□ -0.62
TPM4-216ENST00000592822 PQBP1O60828 265 aaKnown RBP11.2□□□□□ -0.62
TPM4-216ENST00000592822 ATP4AP20648 1035 aa11.2□□□□□ -0.62
TPM4-216ENST00000592822 MARK3P27448 753 aa11.2□□□□□ -0.62
TPM4-216ENST00000592822 JAK3P52333 1124 aa11.2□□□□□ -0.62
TPM4-216ENST00000592822 MLLT1Q03111 559 aaPredicted RBP11.2□□□□□ -0.62
TPM4-216ENST00000592822 PTPN11Q06124 597 aaPredicted RBP11.2□□□□□ -0.62
TPM4-216ENST00000592822 HIC1Q14526 733 aa11.2□□□□□ -0.62
TPM4-216ENST00000592822 IL17AQ16552 155 aa11.2□□□□□ -0.62
TPM4-216ENST00000592822 UGCGQ16739 394 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms