RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 JPH1Q9HDC5 661 aaPredicted RBP10.46□□□□□ -0.73
DNMT1-223ENST00000591239 SLC9A2Q9UBY0 812 aa10.46□□□□□ -0.73
DNMT1-223ENST00000591239 KCNJ14Q9UNX9 436 aa10.46□□□□□ -0.73
DNMT1-223ENST00000591239 NFASCO94856 1347 aa10.46□□□□□ -0.73
DNMT1-223ENST00000591239 IPO5O00410 1097 aaKnown RBP10.45□□□□□ -0.74
DNMT1-223ENST00000591239 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 SOX1O00570 391 aaPredicted RBP10.45□□□□□ -0.74
DNMT1-223ENST00000591239 EDIL3O43854 480 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 SMIM10L2AP0DMW4 78 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 SMIM10L2BP0DMW5 78 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 FDPSP14324 419 aaKnown RBP10.45□□□□□ -0.74
DNMT1-223ENST00000591239 CIITAP33076 1130 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 USP11P51784 963 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 ZNF200P98182 395 aaPredicted RBP10.45□□□□□ -0.74
DNMT1-223ENST00000591239 SETQ01105 290 aaPredicted RBP10.45□□□□□ -0.74
DNMT1-223ENST00000591239 BFSP2Q13515 415 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 HIC1Q14526 733 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 PRR16Q569H4 304 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 C16orf59Q7L2K0 433 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 TBCKQ8TEA7 893 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 WNT8AQ9H1J5 351 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 IL23AQ9NPF7 189 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 GJB4Q9NTQ9 266 aa10.45□□□□□ -0.74
DNMT1-223ENST00000591239 ZNF215Q9UL58 517 aaPredicted RBP10.45□□□□□ -0.74
DNMT1-223ENST00000591239 C17orf102A2RUQ5 167 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 DHX15O43143 795 aaKnown RBP10.44□□□□□ -0.74
DNMT1-223ENST00000591239 JAK2O60674 1132 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 ACRP10323 421 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 HOXC8P31273 242 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 ACTR2P61160 394 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 ST3GAL1Q11201 340 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 RABEP1Q15276 862 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 TMEM240Q5SV17 173 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
DNMT1-223ENST00000591239 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 CAGE1Q8TC20 777 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 GLG1Q92896 1179 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 LENG9Q96B70 501 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 SCLYQ96I15 445 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 RNPC3Q96LT9 517 aaKnown RBP10.44□□□□□ -0.74
DNMT1-223ENST00000591239 ZSCAN31Q96LW9 406 aaPredicted RBP10.44□□□□□ -0.74
DNMT1-223ENST00000591239 UIMC1Q96RL1 719 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.44□□□□□ -0.741e-8■□□□□ 9.8
DNMT1-223ENST00000591239 ZNF577Q9BSK1 485 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 RNPEPQ9H4A4 650 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 SMARCAD1Q9H4L7 1026 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 ERAP1Q9NZ08 941 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 GTF3C3Q9Y5Q9 886 aa10.44□□□□□ -0.74
DNMT1-223ENST00000591239 EMSYQ7Z589 1322 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 DDX39AO00148 427 aaKnown RBP10.43□□□□□ -0.74
DNMT1-223ENST00000591239 LGR5O75473 907 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 ATG7O95352 703 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 CCNE2O96020 404 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 IQCF3P0C7M6 154 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 GNAT1P11488 350 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 CKBP12277 381 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 MARK3P27448 753 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 RBL2Q08999 1139 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 PTK7Q13308 1070 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 NONOQ15233 471 aaKnown RBP eCLIP10.43□□□□□ -0.74
DNMT1-223ENST00000591239 PSRC1Q6PGN9 363 aaPredicted RBP10.43□□□□□ -0.74
DNMT1-223ENST00000591239 ZNF365Q70YC5 407 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 KRT25Q7Z3Z0 450 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 SERINC5Q86VE9 423 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 CCDC83Q8IWF9 413 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 RPUSD2Q8IZ73 545 aaKnown RBP10.43□□□□□ -0.74
DNMT1-223ENST00000591239 CCDC155Q8N6L0 562 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 OXER1Q8TDS5 423 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 AFAP1L1Q8TED9 768 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 DHX38Q92620 1227 aaKnown RBP10.43□□□□□ -0.74
DNMT1-223ENST00000591239 ATP6V0A1Q93050 837 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 VWCEQ96DN2 955 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 TBC1D32Q96NH3 1257 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 PCYT2Q99447 389 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 LLPHQ9BRT6 129 aaKnown RBP10.43□□□□□ -0.74
DNMT1-223ENST00000591239 AZI2Q9H6S1 392 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
DNMT1-223ENST00000591239 TBC1D22BQ9NU19 505 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 SETD4Q9NVD3 440 aa10.43□□□□□ -0.74
DNMT1-223ENST00000591239 COL6A3P12111 3177 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 CHD9Q3L8U1 2897 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 NRCAMQ92823 1304 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 CYP3A7-CYP3A51PA0A087WV96 503 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 CCDC194A0A1B0GVG4 234 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 MSH4O15457 936 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 TREHO43280 583 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 ST18O60284 1047 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 FGBP02675 491 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 SELPP16109 830 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 CYP3A7P24462 503 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 RFC2P35250 354 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 ADAM17P78536 824 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 INF2Q27J81 1249 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 TRIM71Q2Q1W2 868 aaKnown RBP10.42□□□□□ -0.74
DNMT1-223ENST00000591239 ABHD15Q6UXT9 468 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 OTOP2Q7RTS6 562 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 PLPPR4Q7Z2D5 763 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 DEFB128Q7Z7B8 93 aa10.42□□□□□ -0.74
DNMT1-223ENST00000591239 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms