RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 AMPD3Q01432 767 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 KRT76Q01546 638 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 EPHA7Q15375 998 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 STX1AQ16623 288 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 POTEBQ6S5H4 581 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 B3GNT9Q6UX72 402 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 MIER3Q7Z3K6 550 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 TUFT1Q9NNX1 390 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 COBLO75128 1261 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 MYL1P05976 194 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 KCNA2P16389 499 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 ECM1Q16610 540 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 SV2BQ7L1I2 683 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 LARP4BQ92615 738 aaKnown RBP24.93■■□□□ 1.58
ATG4D-209ENST00000588857 RAD54LQ92698 747 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 ANO10Q9NW15 660 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 SLC5A4Q9NY91 659 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 SAMM50Q9Y512 469 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 DOCK3Q8IZD9 2030 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 NFASCO94856 1347 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 BIN1O00499 593 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 SPATA31C1P0DKV0 1188 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 CYP4A11Q02928 519 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 MORC4Q8TE76 937 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 LRRC15Q8TF66 581 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 MTRQ99707 1265 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 HSD17B14Q9BPX1 270 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 BLOC1S4Q9NUP1 217 aa24.92■■□□□ 1.58
ATG4D-209ENST00000588857 POTEFA5A3E0 1075 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 SFNP31947 248 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 JAK3P52333 1124 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 SP3Q02447 781 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 DPYDQ12882 1025 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 NT5DC1Q5TFE4 455 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 POTEGQ6S5H5 508 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 EEPD1Q7L9B9 569 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 ZNF467Q7Z7K2 595 aaPredicted RBP24.91■■□□□ 1.58
ATG4D-209ENST00000588857 KCTD17Q8N5Z5 321 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 NEK9Q8TD19 979 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 LRRC27Q9C0I9 530 aa24.91■■□□□ 1.58
ATG4D-209ENST00000588857 DIS3Q9Y2L1 958 aaKnown RBP24.91■■□□□ 1.58
ATG4D-209ENST00000588857 MGAMO43451 1857 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 FSD2A1L4K1 749 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 DHX8Q14562 1220 aaKnown RBP24.9■■□□□ 1.58
ATG4D-209ENST00000588857 MCM6Q14566 821 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 ZNF746Q6NUN9 644 aaPredicted RBP24.9■■□□□ 1.58
ATG4D-209ENST00000588857 KCNV1Q6PIU1 500 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 KCNK18Q7Z418 384 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 TPH2Q8IWU9 490 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 DYDC2Q96IM9 177 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 BLZF1Q9H2G9 400 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 RGL1Q9NZL6 768 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 DNM3Q9UQ16 869 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 WDR81Q562E7 1941 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 LOXHD1Q8IVV2 1947 aa24.9■■□□□ 1.58
ATG4D-209ENST00000588857 WDR64B1ANS9 1081 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 CAPN15O75808 1086 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 TGFB3P10600 412 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 MUTP22033 750 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 CASP1P29466 404 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 SARSP49591 514 aaKnown RBP24.89■■□□□ 1.58
ATG4D-209ENST00000588857 NLRP12P59046 1061 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 CUL4BQ13620 913 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 CTTNQ14247 550 aaKnown RBP24.89■■□□□ 1.58
ATG4D-209ENST00000588857 PKN2Q16513 984 aaKnown RBP24.89■■□□□ 1.58
ATG4D-209ENST00000588857 ANO6Q4KMQ2 910 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 ARMCX2Q7L311 632 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 GIMAP8Q8ND71 665 aaPredicted RBP24.89■■□□□ 1.58
ATG4D-209ENST00000588857 SPATA20Q8TB22 786 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 ERO1AQ96HE7 468 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 GSDMAQ96QA5 445 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 SENP7Q9BQF6 1050 aa24.89■■□□□ 1.58
ATG4D-209ENST00000588857 JPH1Q9HDC5 661 aaPredicted RBP24.89■■□□□ 1.58
ATG4D-209ENST00000588857 ECM2O94769 699 aaPredicted RBP24.88■■□□□ 1.57
ATG4D-209ENST00000588857 SLITRK3O94933 977 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 CAVIN2O95810 425 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 RDM1Q8NG50 284 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 E9PMD0 336 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 P4HBP07237 508 aaKnown RBP24.88■■□□□ 1.57
ATG4D-209ENST00000588857 ISM2Q6H9L7 571 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 SMAP1Q8IYB5 467 aaPredicted RBP24.88■■□□□ 1.57
ATG4D-209ENST00000588857 TRIML1Q8N9V2 468 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 RBSNQ9H1K0 784 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 SLC9A2Q9UBY0 812 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 MAN1B1Q9UKM7 699 aa24.88■■□□□ 1.57
ATG4D-209ENST00000588857 A0A087WWV3 80 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 CCNE2O96020 404 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 SSBP05455 408 aaKnown RBP eCLIP24.87■■□□□ 1.57
ATG4D-209ENST00000588857 PLA2G4BP0C869 781 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 SP2Q02086 613 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 NEDD9Q14511 834 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 MORN1Q5T089 497 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 CD99L2Q8TCZ2 262 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 MAML3Q96JK9 1138 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 C7orf25Q9BPX7 421 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 NAT10Q9H0A0 1025 aaKnown RBP24.87■■□□□ 1.57
ATG4D-209ENST00000588857 DNAJC25Q9H1X3 360 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 RMND1Q9NWS8 449 aa24.87■■□□□ 1.57
ATG4D-209ENST00000588857 MAP2K5Q13163 448 aa24.86■■□□□ 1.57
ATG4D-209ENST00000588857 FBXO16Q8IX29 292 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms