RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 CALML4Q96GE6 196 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 HEXIM1O94992 359 aaKnown RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 TDP2O95551 362 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 HIBADHP31937 336 aaKnown RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PFKFB3Q16875 520 aaPredicted RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 DCAF17Q5H9S7 520 aaPredicted RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 TBC1D5Q92609 795 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 ALS2CR12Q96Q35 445 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 NUDT12Q9BQG2 462 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PACSIN1Q9BY11 444 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PRDM16Q9HAZ2 1276 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 SEC63Q9UGP8 760 aaKnown RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 CAMTA1Q9Y6Y1 1673 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 BMP15O95972 392 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 OATP04181 439 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 FAM133AQ8N9E0 248 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 SNX29Q8TEQ0 813 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 DUSP9Q99956 384 aaKnown RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 DPH5Q9H2P9 285 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 VCPKMTQ9H867 229 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 RGL1Q9NZL6 768 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PCDHA6Q9UN73 950 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PCDHA8Q9Y5H6 950 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 BZW2Q9Y6E2 419 aaKnown RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PPFIA2O75334 1257 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
LRFN3-204ENST00000588831 TMOD1P28289 359 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 COPB2P35606 906 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PLS1Q14651 629 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 FUKQ8N0W3 1084 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 MIPOL1Q8TD10 442 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 KLHL29Q96CT2 875 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PLA2G12BQ9BX93 195 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PCDHA4Q9UN74 947 aa13.32□□□□□ -0.28
LRFN3-204ENST00000588831 PHF20L1A8MW92 1017 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 CEP104O60308 925 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 DESP17661 470 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 TUBB4BP68371 445 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 HNRNPLLQ8WVV9 542 aaKnown RBP13.31□□□□□ -0.28
LRFN3-204ENST00000588831 VCXQ9H320 206 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 ACTR5Q9H9F9 607 aaPredicted RBP13.31□□□□□ -0.28
LRFN3-204ENST00000588831 AGPSO00116 658 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 MEIS1O00470 390 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 KCNK3O14649 394 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 CYTH3O43739 400 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 C21orf2O43822 256 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 IKQ13123 557 aaPredicted RBP13.31□□□□□ -0.28
LRFN3-204ENST00000588831 KRT71Q3SY84 523 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 MTMR8Q96EF0 704 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 LSM14BQ9BX40 385 aaKnown RBP13.31□□□□□ -0.28
LRFN3-204ENST00000588831 NDST4Q9H3R1 872 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 BATF3Q9NR55 127 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 PALMO75781 387 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 PPP1R37O75864 691 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 CALM1P0DP23 149 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 CALM2P0DP24 149 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 CALM3P0DP25 149 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 ACTN1P12814 892 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 CALML3P27482 149 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 VPS41P49754 854 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 ZRSR2Q15696 482 aaKnown RBP13.31□□□□□ -0.28
LRFN3-204ENST00000588831 KIAA0753Q2KHM9 967 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 ATP6V0A4Q9HBG4 840 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 DLGAP2Q9P1A6 1054 aa13.31□□□□□ -0.28
LRFN3-204ENST00000588831 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
LRFN3-204ENST00000588831 GCOM1H8Y6P7 765 aaPredicted RBP13.3□□□□□ -0.28
LRFN3-204ENST00000588831 GLI1P08151 1106 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 MYZAPP0CAP1 466 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 TRIM14Q14142 442 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 TTI2Q6NXR4 508 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 BZW1Q7L1Q6 419 aaKnown RBP13.3□□□□□ -0.28
LRFN3-204ENST00000588831 SPATA21Q7Z572 469 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 CUL5Q93034 780 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 TRIM9Q9C026 710 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 PHACTR1Q9C0D0 580 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 MMADHCQ9H3L0 296 aaPredicted RBP13.3□□□□□ -0.28
LRFN3-204ENST00000588831 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 CHORDC1Q9UHD1 332 aaPredicted RBP13.3□□□□□ -0.28
LRFN3-204ENST00000588831 CCNL1Q9UK58 526 aaPredicted RBP13.3□□□□□ -0.28
LRFN3-204ENST00000588831 PCNTO95613 3336 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 RASSF10A6NK89 507 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 OR52Z1P0C646 297 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
LRFN3-204ENST00000588831 ZBED6P86452 979 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 SV2BQ7L1I2 683 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 ZIM3Q96PE6 472 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
LRFN3-204ENST00000588831 RTCBQ9Y3I0 505 aaKnown RBP13.3□□□□□ -0.28
LRFN3-204ENST00000588831 FAM196BA6NMK8 535 aa13.29□□□□□ -0.28
LRFN3-204ENST00000588831 ZNF34Q8IZ26 560 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms