RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SART3Q15020 963 aaKnown RBP21.25■□□□□ 0.99
CCDC43-204ENST00000588687 TIGD5Q53EQ6 642 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 XRRA1Q6P2D8 792 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 RUFY4Q6ZNE9 571 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 CATIPQ7Z7H3 387 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 RPAINQ86UA6 219 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 ZNF654Q8IZM8 581 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 PIBF1Q8WXW3 757 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 KAT6AQ92794 2004 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 APBB2Q92870 758 aa21.25■□□□□ 0.99
CCDC43-204ENST00000588687 IFIH1Q9BYX4 1025 aaKnown RBP21.25■□□□□ 0.99
CCDC43-204ENST00000588687 ZNF215Q9UL58 517 aaPredicted RBP21.25■□□□□ 0.99
CCDC43-204ENST00000588687 PIEZO1Q92508 2521 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 DDAH1O94760 285 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 GNAT1P11488 350 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 KCNA2P16389 499 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 HOXD11P31277 338 aaPredicted RBP21.24■□□□□ 0.99
CCDC43-204ENST00000588687 ARHGAP4P98171 946 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 MGAT3Q09327 533 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 TMEM192Q8IY95 271 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 RUFY2Q8WXA3 655 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 MAP4K1Q92918 833 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 EHMT1Q9H9B1 1298 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 KIAA1671Q9BY89 1806 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 NRCAMQ92823 1304 aa21.24■□□□□ 0.99
CCDC43-204ENST00000588687 TTC3P53804 2025 aa21.23■□□□□ 0.99
CCDC43-204ENST00000588687 GRXCR2A6NFK2 248 aa21.23■□□□□ 0.99
CCDC43-204ENST00000588687 ATP9AO75110 1047 aa21.23■□□□□ 0.99
CCDC43-204ENST00000588687 PLEKHA8P1O95397 391 aa21.23■□□□□ 0.99
CCDC43-204ENST00000588687 SMARCA1P28370 1054 aa21.23■□□□□ 0.99
CCDC43-204ENST00000588687 SP4Q02446 784 aa21.23■□□□□ 0.99
CCDC43-204ENST00000588687 UTP14CQ5TAP6 766 aaKnown RBP21.23■□□□□ 0.99
CCDC43-204ENST00000588687 PTCRAQ6ISU1 281 aaPredicted RBP21.23■□□□□ 0.99
CCDC43-204ENST00000588687 BANK1Q8NDB2 785 aa21.23■□□□□ 0.99
CCDC43-204ENST00000588687 C5orf67F2Z3F1 127 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 UPP2O95045 317 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 ITGB5P18084 799 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 GPM6BQ13491 265 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 PTPROQ16827 1216 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 TCEAL5Q5H9L2 206 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 GJD3Q8N144 294 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 SRBD1Q8N5C6 995 aaKnown RBP21.22■□□□□ 0.99
CCDC43-204ENST00000588687 SMARCC2Q8TAQ2 1214 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 GPRASP2Q96D09 838 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 PABPC5Q96DU9 382 aaKnown RBP21.22■□□□□ 0.99
CCDC43-204ENST00000588687 RRP36Q96EU6 259 aaKnown RBP21.22■□□□□ 0.99
CCDC43-204ENST00000588687 HCN4Q9Y3Q4 1203 aa21.22■□□□□ 0.99
CCDC43-204ENST00000588687 MBLAC1A4D2B0 266 aaPredicted RBP21.21■□□□□ 0.99
CCDC43-204ENST00000588687 H3BQ06 376 aaPredicted RBP21.21■□□□□ 0.99
CCDC43-204ENST00000588687 GHRP10912 638 aa21.21■□□□□ 0.99
CCDC43-204ENST00000588687 TCF7P36402 384 aaPredicted RBP21.21■□□□□ 0.99
CCDC43-204ENST00000588687 LPIN1Q14693 890 aa21.21■□□□□ 0.99
CCDC43-204ENST00000588687 RBM8AQ9Y5S9 174 aaKnown RBP21.21■□□□□ 0.99
CCDC43-204ENST00000588687 GSTTP1A0A1W2PQM5 241 aa21.2■□□□□ 0.98
CCDC43-204ENST00000588687 SH2B2O14492 632 aaPredicted RBP21.2■□□□□ 0.98
CCDC43-204ENST00000588687 MARCH8Q5T0T0 291 aa21.2■□□□□ 0.98
CCDC43-204ENST00000588687 TAF2Q6P1X5 1199 aa21.2■□□□□ 0.98
CCDC43-204ENST00000588687 CTCFLQ8NI51 663 aaPredicted RBP21.2■□□□□ 0.98
CCDC43-204ENST00000588687 LINC01599Q8WXQ3 324 aa21.2■□□□□ 0.98
CCDC43-204ENST00000588687 MTA3Q9BTC8 594 aa21.2■□□□□ 0.98
CCDC43-204ENST00000588687 NSUN3Q9H649 340 aaKnown RBP21.2■□□□□ 0.98
CCDC43-204ENST00000588687 ADGRA3Q8IWK6 1321 aa21.2■□□□□ 0.98
CCDC43-204ENST00000588687 KIF5BP33176 963 aa21.19■□□□□ 0.98
CCDC43-204ENST00000588687 LTBRP36941 435 aa21.19■□□□□ 0.98
CCDC43-204ENST00000588687 NLRX1Q86UT6 975 aa21.19■□□□□ 0.98
CCDC43-204ENST00000588687 CMTR1Q8N1G2 835 aaKnown RBP21.19■□□□□ 0.98
CCDC43-204ENST00000588687 GIMAP8Q8ND71 665 aaPredicted RBP21.19■□□□□ 0.98
CCDC43-204ENST00000588687 CLP1Q92989 425 aaKnown RBP21.19■□□□□ 0.98
CCDC43-204ENST00000588687 CUL5Q93034 780 aa21.19■□□□□ 0.98
CCDC43-204ENST00000588687 IL17RAQ96F46 866 aa21.19■□□□□ 0.98
CCDC43-204ENST00000588687 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
CCDC43-204ENST00000588687 UBIAD1Q9Y5Z9 338 aa21.19■□□□□ 0.98
CCDC43-204ENST00000588687 PRC1O43663 620 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 PPFIA1Q13136 1202 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 GRIK4Q16099 956 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 CTC1Q2NKJ3 1217 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 PUS10Q3MIT2 529 aaKnown RBP21.18■□□□□ 0.98
CCDC43-204ENST00000588687 FBXO47Q5MNV8 452 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 CRIPAKQ8N1N5 446 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 ZNF689Q96CS4 500 aaPredicted RBP21.18■□□□□ 0.98
CCDC43-204ENST00000588687 PCYT2Q99447 389 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 LZTS2Q9BRK4 669 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 SEC63Q9UGP8 760 aaKnown RBP21.18■□□□□ 0.98
CCDC43-204ENST00000588687 TUBE1Q9UJT0 475 aa21.18■□□□□ 0.98
CCDC43-204ENST00000588687 LOXHD1Q8IVV2 1947 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 PRR33A8MZF0 331 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 RXRAP19793 462 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 MARK3P27448 753 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 CTNNB1P35222 781 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 ZP2Q05996 745 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 UBE2SQ16763 222 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 FIBCD1Q8N539 461 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 ZBTB10Q96DT7 871 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 CDHR1Q96JP9 859 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 ERAP1Q9NZ08 941 aa21.17■□□□□ 0.98
CCDC43-204ENST00000588687 POTEB3A0JP26 581 aa21.16■□□□□ 0.98
CCDC43-204ENST00000588687 GRM6O15303 877 aa21.16■□□□□ 0.98
CCDC43-204ENST00000588687 BMPR1AP36894 532 aa21.16■□□□□ 0.98
CCDC43-204ENST00000588687 MTMR1Q13613 665 aa21.16■□□□□ 0.98
CCDC43-204ENST00000588687 POTEBQ6S5H4 581 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms