RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 ARHGAP4P98171 946 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 AP3B2Q13367 1082 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 CEP55Q53EZ4 464 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 SESTD1Q86VW0 696 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 REXO1Q8N1G1 1221 aaKnown RBP10.09□□□□□ -0.79
SDF2-207ENST00000588472 CCDC155Q8N6L0 562 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 NECAB1Q8N987 351 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 SEPT1Q8WYJ6 367 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 DHX38Q92620 1227 aaKnown RBP10.09□□□□□ -0.79
SDF2-207ENST00000588472 ATP6V0A1Q93050 837 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 AIFM3Q96NN9 605 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 SDF4Q9BRK5 362 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 ZMYND12Q9H0C1 365 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 MTIF3Q9H2K0 278 aaKnown RBP10.09□□□□□ -0.79
SDF2-207ENST00000588472 SETD4Q9NVD3 440 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 ZNF215Q9UL58 517 aaPredicted RBP10.09□□□□□ -0.79
SDF2-207ENST00000588472 TPCN1Q9ULQ1 816 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 NID2Q14112 1375 aa10.09□□□□□ -0.79
SDF2-207ENST00000588472 GSTTP1A0A1W2PQM5 241 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 TREHO43280 583 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 CKBP12277 381 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 SREBF1P36956 1147 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 NEK4P51957 841 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 RABGGTBP53611 331 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 ANAPC15P60006 121 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 IGBP1P78318 339 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 SCRN1Q12765 414 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 PTK7Q13308 1070 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 LRRC8DQ7L1W4 858 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 PLA2G4DQ86XP0 818 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 BICD2Q8TD16 824 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 HERVK_113Q902F9 699 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 WNT8BQ93098 351 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 CTAGE1Q96RT6 745 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 RNPEPQ9H4A4 650 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 AGO4Q9HCK5 861 aaKnown RBP10.08□□□□□ -0.8
SDF2-207ENST00000588472 JPH1Q9HDC5 661 aaPredicted RBP10.08□□□□□ -0.8
SDF2-207ENST00000588472 SLC9A2Q9UBY0 812 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 SLC4A7Q9Y6M7 1214 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 EYSQ5T1H1 3165 aa10.08□□□□□ -0.8
SDF2-207ENST00000588472 CHD9Q3L8U1 2897 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 ESYT2A0FGR8 921 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 FAM86B1E9PN63 330 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 MEIS1O00470 390 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 MAFGO15525 162 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 EIF5BO60841 1220 aaKnown RBP10.07□□□□□ -0.8
SDF2-207ENST00000588472 DEXIO95424 95 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 FAM86B2P0C5J1 330 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 GNAT1P11488 350 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 ACTN1P12814 892 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 SELPP16109 830 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 DNAJB2P25686 324 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 RFC2P35250 354 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 FOSBP53539 338 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 ITGB3BPQ13352 177 aaPredicted RBP10.07□□□□□ -0.8
SDF2-207ENST00000588472 PRR16Q569H4 304 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 ZNF618Q5T7W0 954 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 TRMT1LQ7Z2T5 733 aaKnown RBP10.07□□□□□ -0.8
SDF2-207ENST00000588472 CAGE1Q8TC20 777 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 AFAP1L1Q8TED9 768 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 TIFAQ96CG3 184 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 VWCEQ96DN2 955 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 KCNJ14Q9UNX9 436 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 SCN5AQ14524 2016 aa10.07□□□□□ -0.8
SDF2-207ENST00000588472 SPTBN5Q9NRC6 3674 aaKnown RBP10.06□□□□□ -0.8
SDF2-207ENST00000588472 BACH1O14867 736 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 PFKFB2O60825 505 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 CDKL5O76039 1030 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 CTSHP09668 335 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 MYOGP15173 224 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 ACTR2P61160 394 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 PPFIA1Q13136 1202 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 ANKRD1Q15327 319 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 MCTP2Q6DN12 878 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 ZBTB10Q96DT7 871 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 ZNF577Q9BSK1 485 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 PBX4Q9BYU1 374 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 SMARCAD1Q9H4L7 1026 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 AZI2Q9H6S1 392 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 SH3GLB2Q9NR46 395 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 GJB4Q9NTQ9 266 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 ERAP1Q9NZ08 941 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 TCEAL9Q9UHQ7 104 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 MSRAQ9UJ68 235 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 PCDHA4Q9UN74 947 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 TRPC6Q9Y210 931 aa10.06□□□□□ -0.8
SDF2-207ENST00000588472 TRIP12Q14669 1992 aaPredicted RBP10.06□□□□□ -0.8
SDF2-207ENST00000588472 RSPH10B2B2RC85 870 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 IPO5O00410 1097 aaKnown RBP10.05□□□□□ -0.8
SDF2-207ENST00000588472 NBNO60934 754 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 LARGE1O95461 756 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 PFKMP08237 780 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 CYP3A4P08684 503 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 RSPH10BP0C881 870 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 ATP2A2P16615 1042 aaKnown RBP10.05□□□□□ -0.8
SDF2-207ENST00000588472 GPNMBQ14956 572 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
SDF2-207ENST00000588472 GRIK4Q16099 956 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms