RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 UPP2O95045 317 aa15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 PDE4AP27815 886 aa15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 PTH1RQ03431 593 aa15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 COL9A3Q14050 684 aaPredicted RBP15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 PUS10Q3MIT2 529 aaKnown RBP15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 LINC01599Q8WXQ3 324 aa15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 APBB2Q92870 758 aa15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 CLP1Q92989 425 aaKnown RBP15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 ADGRA3Q8IWK6 1321 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 MBLAC1A4D2B0 266 aaPredicted RBP15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 PIK3CDO00329 1044 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 NOP56O00567 594 aaKnown RBP15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 GRM6O15303 877 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 DLX2Q07687 328 aaPredicted RBP15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 HYAL1Q12794 435 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 CAMK1Q14012 370 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 NEDD9Q14511 834 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 GNPTABQ3T906 1256 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 MARCH8Q5T0T0 291 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 PCNX4Q63HM2 1172 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 ZNF689Q96CS4 500 aaPredicted RBP15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 RTEL1Q9NZ71 1219 aa15.95■□□□□ 0.14
CLPTM1-208ENST00000588274 ATP9AO75110 1047 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 TBX10O75333 385 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 GHRP10912 638 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 KCNA2P16389 499 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 SSTR3P32745 418 aaPredicted RBP15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 ARHGAP4P98171 946 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 LPIN1Q14693 890 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 USP17L6PQ6QN14 398 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 MB21D2Q8IYB1 491 aaPredicted RBP15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 IGDCC4Q8TDY8 1250 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 SENP7Q9BQF6 1050 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 PRKAG3Q9UGI9 489 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 TTC3P53804 2025 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 NRCAMQ92823 1304 aa15.94■□□□□ 0.14
CLPTM1-208ENST00000588274 E7EWF7 191 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 IFIT3O14879 490 aaKnown RBP15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 DCXO43602 365 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 ALADP13716 330 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 ITGB5P18084 799 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 CTNNB1P35222 781 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 TRAF1Q13077 416 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 ADHFE1Q8IWW8 467 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 IL17RAQ96F46 866 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 SPZ1Q9BXG8 430 aa15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 ZNF215Q9UL58 517 aaPredicted RBP15.93■□□□□ 0.14
CLPTM1-208ENST00000588274 GSTTP1A0A1W2PQM5 241 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 GNAT1P11488 350 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 GTF2F1P35269 517 aaKnown RBP eCLIP15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 IRS1P35568 1242 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 TCF7P36402 384 aaPredicted RBP15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 BMPR1AP36894 532 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 SMAD2Q15796 467 aaKnown RBP15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 FBXO47Q5MNV8 452 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 TTC22Q5TAA0 569 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 UTP14CQ5TAP6 766 aaKnown RBP15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 EXOC6Q8TAG9 804 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 ZBTB10Q96DT7 871 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 CLDND1Q9NY35 253 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 USP34Q70CQ2 3546 aa15.92■□□□□ 0.14
CLPTM1-208ENST00000588274 ENPP3O14638 875 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 LINC01565O15544 149 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 MMP1P03956 469 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 RB1P06400 928 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 DNAJB1P25685 340 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 SP4Q02446 784 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 WTAPQ15007 396 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 TAF2Q6P1X5 1199 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 XRRA1Q6P2D8 792 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 FIBCD1Q8N539 461 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 PIBF1Q8WXW3 757 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 PCYT2Q99447 389 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 MAP3K14Q99558 947 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 C11orf84Q9BUA3 381 aaPredicted RBP15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 MYL10Q9BUA6 226 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 LMAN2LQ9H0V9 348 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 AGO3Q9H9G7 860 aaKnown RBP15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 LY9Q9HBG7 655 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 TECTAO75443 2155 aa15.91■□□□□ 0.14
CLPTM1-208ENST00000588274 MBTPS2O43462 519 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 DGKIO75912 1065 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 PLEKHA8P1O95397 391 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 CHMLP26374 656 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 NHLH1Q02575 133 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 GRIK4Q16099 956 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 RTN4RL1Q86UN2 441 aaPredicted RBP15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 ALYREFQ86V81 257 aaKnown RBP15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 GPRASP2Q96D09 838 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 MSLNLQ96KJ4 702 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 TUBE1Q9UJT0 475 aa15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
CLPTM1-208ENST00000588274 TRDNQ13061 729 aa15.89■□□□□ 0.13
CLPTM1-208ENST00000588274 PPFIA1Q13136 1202 aa15.89■□□□□ 0.13
CLPTM1-208ENST00000588274 CLUL1Q15846 466 aa15.89■□□□□ 0.13
CLPTM1-208ENST00000588274 HERC4Q5GLZ8 1057 aaPredicted RBP15.89■□□□□ 0.13
CLPTM1-208ENST00000588274 TSHZ1Q6ZSZ6 1077 aa15.89■□□□□ 0.13
CLPTM1-208ENST00000588274 HFE2Q6ZVN8 426 aa15.89■□□□□ 0.13
CLPTM1-208ENST00000588274 ZNF654Q8IZM8 581 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms