RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 TRIM9Q9C026 710 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 NT5C3AQ9H0P0 336 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 CNOT7Q9UIV1 285 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 DICER1Q9UPY3 1922 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 DOCK1Q14185 1865 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 SHTN1A0MZ66 631 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 H7C1D1 291 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 WDR46O15213 610 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 KLRC4O43908 158 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 CYP3A4P08684 503 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 CIITAP33076 1130 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 ABCD1P33897 745 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 LIG3P49916 1009 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 ETF1P62495 437 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 TBC1D25Q3MII6 688 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 USH1GQ495M9 461 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 COBLL1Q53SF7 1204 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 SV2BQ7L1I2 683 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 TMC6Q7Z403 805 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 VSTM4Q8IW00 320 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 SNX29Q8TEQ0 813 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 HAS1Q92839 578 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 KIAA1683Q9H0B3 1180 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 TRMT1Q9NXH9 659 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 PNMA2Q9UL42 364 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 PCDHA12Q9UN75 941 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 GJA3Q9Y6H8 435 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 POTEB2H3BUK9 544 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 SFPQP23246 707 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC01539-201ENST00000587904 GRB10Q13322 594 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 KIAA1755Q5JYT7 1200 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 FBXW10Q5XX13 1052 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 RINLQ6ZS11 566 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 RSRC2Q7L4I2 434 aaKnown RBP10.64□□□□□ -0.71
LINC01539-201ENST00000587904 GIMAP8Q8ND71 665 aaPredicted RBP10.64□□□□□ -0.71
LINC01539-201ENST00000587904 THOC1Q96FV9 657 aaKnown RBP10.64□□□□□ -0.71
LINC01539-201ENST00000587904 MED15Q96RN5 788 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 ZNF341Q9BYN7 854 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 DEFB129Q9H1M3 183 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 HACL1Q9UJ83 578 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 CTNND2Q9UQB3 1225 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 PPP2R3BQ9Y5P8 575 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 PVALEFA0A1B0GWK0 134 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 POTEMA6NI47 508 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 PSMA7O14818 248 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 OPLAHO14841 1288 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 EGFRP00533 1210 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 IMPDH2P12268 514 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 HOXD11P31277 338 aaPredicted RBP10.64□□□□□ -0.71
LINC01539-201ENST00000587904 INPP5BP32019 993 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 PSMD2Q13200 908 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 HAUS3Q68CZ6 603 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 KLHL10Q6JEL2 608 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 ADSSL1Q8N142 457 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 KCTD17Q8N5Z5 321 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 CEP112Q8N8E3 955 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 MAGEC3Q8TD91 643 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 LARP4BQ92615 738 aaKnown RBP10.64□□□□□ -0.71
LINC01539-201ENST00000587904 FAM20AQ96MK3 541 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 PNMA5Q96PV4 448 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 BATF3Q9NR55 127 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 EXOC1Q9NV70 894 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 RABGAP1Q9Y3P9 1069 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 FAM169AQ9Y6X4 670 aa10.64□□□□□ -0.71
LINC01539-201ENST00000587904 ZNF541Q9H0D2 1346 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 A0A1B0GTH6 734 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 GCOM1H8Y6P7 765 aaPredicted RBP10.63□□□□□ -0.71
LINC01539-201ENST00000587904 EBAG9O00559 213 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 FSBPO95073 299 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 FAM163BP0C2L3 166 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 POLR2MP0CAP2 368 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 GCKP35557 465 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 PRELPP51888 382 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 USP14P54578 494 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 TUBB4BP68371 445 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 ASIC1P78348 528 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 TBC1D10BQ4KMP7 808 aaPredicted RBP10.63□□□□□ -0.71
LINC01539-201ENST00000587904 FILIP1LQ4L180 1135 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 RBM12BQ8IXT5 1001 aaKnown RBP10.63□□□□□ -0.71
LINC01539-201ENST00000587904 SMYD4Q8IYR2 804 aaPredicted RBP10.63□□□□□ -0.71
LINC01539-201ENST00000587904 GPC2Q8N158 579 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 ERMNQ8TAM6 284 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 ETNPPLQ8TBG4 499 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 LRRC15Q8TF66 581 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 NOC3LQ8WTT2 800 aaKnown RBP10.63□□□□□ -0.71
LINC01539-201ENST00000587904 NELFBQ8WX92 580 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 RAD54LQ92698 747 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 KIFC2Q96AC6 838 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 DHTKD1Q96HY7 919 aaPredicted RBP10.63□□□□□ -0.71
LINC01539-201ENST00000587904 CRACR2AQ9BSW2 395 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 SPON1Q9HCB6 807 aa10.63□□□□□ -0.71
LINC01539-201ENST00000587904 ANKRD65E5RJM6 399 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 ICAM1P05362 532 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 FDX1P10109 184 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 LMNB1P20700 586 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 CLNS1AP54105 237 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms