RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 HEATR3Q7Z4Q2 680 aa17.47■□□□□ 0.39
PRKCSH-204ENST00000587290 TMEM87BQ96K49 555 aa17.47■□□□□ 0.39
PRKCSH-204ENST00000587290 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
PRKCSH-204ENST00000587290 ZNF215Q9UL58 517 aaPredicted RBP17.47■□□□□ 0.39
PRKCSH-204ENST00000587290 EFCAB14O75071 495 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 AMHP03971 560 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 ADAM17P78536 824 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 TMTC3Q6ZXV5 915 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 NLRX1Q86UT6 975 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 HLA-CQ95604 372 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 PGBD1Q96JS3 809 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 LZTS2Q9BRK4 669 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 SLC12A7Q9Y666 1083 aa17.46■□□□□ 0.39
PRKCSH-204ENST00000587290 RALGAPA2Q2PPJ7 1873 aa17.46■□□□□ 0.38
PRKCSH-204ENST00000587290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 COL9A1P20849 921 aa17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 SMARCA1P28370 1054 aa17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 LIFRP42702 1097 aa17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 GNAQP50148 359 aa17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 SEPT8Q92599 483 aa17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 SENP7Q9BQF6 1050 aa17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 CNTNAP5Q8WYK1 1306 aa17.45■□□□□ 0.38
PRKCSH-204ENST00000587290 GSTTP1A0A1W2PQM5 241 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 CHRNA1P02708 482 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 GHRP10912 638 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 HTRA4P83105 476 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 MTMR1Q13613 665 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 AAK1Q2M2I8 961 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 WWC2Q6AWC2 1192 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 XRRA1Q6P2D8 792 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 TMTC2Q8N394 836 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 FBXO22Q8NEZ5 403 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 GPRASP2Q96D09 838 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 YME1L1Q96TA2 773 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 MTA3Q9BTC8 594 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 PCDHA6Q9UN73 950 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 COG5Q9UP83 839 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 INSL6Q9Y581 213 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 PCDHA8Q9Y5H6 950 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 UBIAD1Q9Y5Z9 338 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 KIAA1671Q9BY89 1806 aa17.44■□□□□ 0.38
PRKCSH-204ENST00000587290 SPDYE3A6NKU9 549 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 CALM1P0DP23 149 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 CALM2P0DP24 149 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 CALM3P0DP25 149 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 GNAT1P11488 350 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 IGBP1P78318 339 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 PPFIA1Q13136 1202 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 APOA5Q6Q788 366 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 CYP2W1Q8TAV3 490 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 IFIH1Q9BYX4 1025 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
PRKCSH-204ENST00000587290 CAND2O75155 1236 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 GRIK4Q16099 956 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 ADCK5Q3MIX3 580 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 EPC2Q52LR7 807 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 SGMS1Q86VZ5 419 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 DNAJB3Q8WWF6 145 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 GLG1Q92896 1179 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 KHSRPQ92945 711 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 TOP1MTQ969P6 601 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 PCYT2Q99447 389 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 JADE2Q9NQC1 790 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 NRCAMQ92823 1304 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 COL4A6Q14031 1691 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 TTC3P53804 2025 aa17.42■□□□□ 0.38
PRKCSH-204ENST00000587290 MGAT3Q09327 533 aa17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 FAM26DQ5JW98 314 aa17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 MARCH8Q5T0T0 291 aa17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 GIMAP8Q8ND71 665 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 TRAPPC12Q8WVT3 735 aa17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 SEPT1Q8WYJ6 367 aa17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 UBE2ZQ9H832 354 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 TMEM260Q9NX78 707 aa17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 TUBE1Q9UJT0 475 aa17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 EVPLQ92817 2033 aa17.41■□□□□ 0.38
PRKCSH-204ENST00000587290 CSPG5O95196 566 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 NAPAP54920 295 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 FUT2Q10981 343 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 LPIN1Q14693 890 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 CDHR1Q96JP9 859 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 NEK1Q96PY6 1258 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 UIMC1Q96RL1 719 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 FAM49AQ9H0Q0 323 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 EPHX3Q9H6B9 360 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 CD320Q9NPF0 282 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 ERAP1Q9NZ08 941 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 LMCD1Q9NZU5 365 aa17.4■□□□□ 0.38
PRKCSH-204ENST00000587290 ADAMTS3O15072 1205 aa17.39■□□□□ 0.37
PRKCSH-204ENST00000587290 ARP10275 920 aa17.39■□□□□ 0.37
PRKCSH-204ENST00000587290 CPA1P15085 419 aa17.39■□□□□ 0.37
PRKCSH-204ENST00000587290 KCNA5P22460 613 aa17.39■□□□□ 0.37
PRKCSH-204ENST00000587290 TMEM62Q0P6H9 643 aa17.39■□□□□ 0.37
PRKCSH-204ENST00000587290 RTN1Q16799 776 aa17.39■□□□□ 0.37
PRKCSH-204ENST00000587290 BMP2KLQ5H9B9 411 aa17.39■□□□□ 0.37
PRKCSH-204ENST00000587290 JPH1Q9HDC5 661 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms