RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 TBCKQ8TEA7 893 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 LRCH3Q96II8 777 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 KIF2CQ99661 725 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.84■□□□□ 0.29
ATG4D-207ENST00000587256 ZNF577Q9BSK1 485 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 AZI2Q9H6S1 392 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 IL23AQ9NPF7 189 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 EMSYQ7Z589 1322 aa16.84■□□□□ 0.29
ATG4D-207ENST00000587256 LAMA3Q16787 3333 aa16.83■□□□□ 0.29
ATG4D-207ENST00000587256 GSTTP1A0A1W2PQM5 241 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 IPO5O00410 1097 aaKnown RBP16.83■□□□□ 0.28
ATG4D-207ENST00000587256 JAK2O60674 1132 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 MARK3P27448 753 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 ACTR2P61160 394 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 NONOQ15233 471 aaKnown RBP eCLIP16.83■□□□□ 0.28
ATG4D-207ENST00000587256 RABEP1Q15276 862 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 NPY5RQ15761 445 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 KRT25Q7Z3Z0 450 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 ERAP1Q9NZ08 941 aa16.83■□□□□ 0.28
ATG4D-207ENST00000587256 CCDC194A0A1B0GVG4 234 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 CIITAP33076 1130 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 FOSBP53539 338 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 ZNF200P98182 395 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-207ENST00000587256 PTK7Q13308 1070 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 DEFB128Q7Z7B8 93 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 CCDC83Q8IWF9 413 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 AFAP1L1Q8TED9 768 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 DHX38Q92620 1227 aaKnown RBP16.82■□□□□ 0.28
ATG4D-207ENST00000587256 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 CTAGE1Q96RT6 745 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 SMARCAD1Q9H4L7 1026 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 BRMS1Q9HCU9 246 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 GJB4Q9NTQ9 266 aa16.82■□□□□ 0.28
ATG4D-207ENST00000587256 M0R2N6 131 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 BACH1O14867 736 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 ST18O60284 1047 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 GNAT1P11488 350 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 FDPSP14324 419 aaKnown RBP16.81■□□□□ 0.28
ATG4D-207ENST00000587256 SELPP16109 830 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 RFC2P35250 354 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 USP11P51784 963 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 ST3GAL1Q11201 340 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 PPFIA1Q13136 1202 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 TRIM29Q14134 588 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 HIC1Q14526 733 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 TMEM240Q5SV17 173 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 ZNF365Q70YC5 407 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 C16orf59Q7L2K0 433 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 RPUSD2Q8IZ73 545 aaKnown RBP16.81■□□□□ 0.28
ATG4D-207ENST00000587256 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
ATG4D-207ENST00000587256 MTIF3Q9H2K0 278 aaKnown RBP16.81■□□□□ 0.28
ATG4D-207ENST00000587256 RNPEPQ9H4A4 650 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 SH2B1Q9NRF2 756 aaPredicted RBP16.81■□□□□ 0.28
ATG4D-207ENST00000587256 TBC1D22BQ9NU19 505 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 SETD4Q9NVD3 440 aa16.81■□□□□ 0.28
ATG4D-207ENST00000587256 LGR5O75473 907 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 TDP2O95551 362 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 CCNE2O96020 404 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 FGBP02675 491 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 PFKMP08237 780 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 IQCF3P0C7M6 154 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 HOXC8P31273 242 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 KRT2P35908 639 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 RBL2Q08999 1139 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 INF2Q27J81 1249 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 LRRC8DQ7L1W4 858 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 SERINC5Q86VE9 423 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 LMBR1Q8WVP7 490 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 LENG9Q96B70 501 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 TRPC6Q9Y210 931 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
ATG4D-207ENST00000587256 NRCAMQ92823 1304 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 ZBBXA8MT70 800 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 DHX15O43143 795 aaKnown RBP16.79■□□□□ 0.28
ATG4D-207ENST00000587256 TREHO43280 583 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 SLC34A2O95436 690 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 CKBP12277 381 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 THPOP40225 353 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 KRT76Q01546 638 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 FAM160B1Q5W0V3 765 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 MIS18BP1Q6P0N0 1132 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 PIK3AP1Q6ZUJ8 805 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 OXER1Q8TDS5 423 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 WNT8BQ93098 351 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 PCYT2Q99447 389 aa16.79■□□□□ 0.28
ATG4D-207ENST00000587256 FTOQ9C0B1 505 aaKnown RBP eCLIP16.79■□□□□ 0.28
ATG4D-207ENST00000587256 MSH4O15457 936 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 ACTN1P12814 892 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 STAT5BP51692 787 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 IGBP1P78318 339 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 GRIK4Q16099 956 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
ATG4D-207ENST00000587256 LETM2Q2VYF4 491 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 LRCH2Q5VUJ6 765 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 ZNF746Q6NUN9 644 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-207ENST00000587256 MOXD1Q6UVY6 613 aa16.78■□□□□ 0.28
ATG4D-207ENST00000587256 NEK8Q86SG6 692 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms