RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 CSF2RAP15509 400 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 ST3GAL1Q11201 340 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 BFSP2Q13515 415 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 NONOQ15233 471 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 PRR16Q569H4 304 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 TRIM50Q86XT4 487 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 CCDC83Q8IWF9 413 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 CAGE1Q8TC20 777 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 CTAGE1Q96RT6 745 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 ZNF577Q9BSK1 485 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 WNT8AQ9H1J5 351 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 SMARCAD1Q9H4L7 1026 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 BRMS1Q9HCU9 246 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 TBC1D22BQ9NU19 505 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 ERAP1Q9NZ08 941 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 UMODL1Q5DID0 1318 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 EMSYQ7Z589 1322 aa15.1■□□□□ 0.01
SMARCA4-210ENST00000586892 CYP3A7-CYP3A51PA0A087WV96 503 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 CCDC194A0A1B0GVG4 234 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 C17orf102A2RUQ5 167 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 DTNBO60941 627 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 SMIM10L2AP0DMW4 78 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 SMIM10L2BP0DMW5 78 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 GNAT1P11488 350 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 CYP3A7P24462 503 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 HOXC8P31273 242 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 EPHB4P54760 987 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 CCL23P55773 120 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 ACTR2P61160 394 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 PTK7Q13308 1070 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 TRIM29Q14134 588 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 SHHQ15465 462 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 MOXD1Q6UVY6 613 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 RETREG2Q8NC44 543 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 GLG1Q92896 1179 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 LENG9Q96B70 501 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 AZI2Q9H6S1 392 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 GJB4Q9NTQ9 266 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 TCEAL9Q9UHQ7 104 aa15.09■□□□□ 0.01
SMARCA4-210ENST00000586892 DHX15O43143 795 aaKnown RBP15.08■□□□□ 0
SMARCA4-210ENST00000586892 EDIL3O43854 480 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 LGR5O75473 907 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 ATG7O95352 703 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 KRT2P35908 639 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 HMGN5P82970 282 aaKnown RBP15.08■□□□□ 0
SMARCA4-210ENST00000586892 RBL2Q08999 1139 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 Q4G0T1 1027 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 C9orf50Q5SZB4 431 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 PSRC1Q6PGN9 363 aaPredicted RBP15.08■□□□□ 0
SMARCA4-210ENST00000586892 AFAP1L1Q8TED9 768 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 BACH2Q9BYV9 841 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 IL23AQ9NPF7 189 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 NRCAMQ92823 1304 aa15.08■□□□□ 0
SMARCA4-210ENST00000586892 DDX39AO00148 427 aaKnown RBP15.07■□□□□ 0
SMARCA4-210ENST00000586892 MMP1P03956 469 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 PFKMP08237 780 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 RFC2P35250 354 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 SLC26A2P50443 739 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 KRT76Q01546 638 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 HIC1Q14526 733 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 INF2Q27J81 1249 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 ZNF746Q6NUN9 644 aaPredicted RBP15.07■□□□□ 0
SMARCA4-210ENST00000586892 PLPPR4Q7Z2D5 763 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 SERINC5Q86VE9 423 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 SMAP1Q8IYB5 467 aaPredicted RBP15.07■□□□□ 0
SMARCA4-210ENST00000586892 RPUSD2Q8IZ73 545 aaKnown RBP15.07■□□□□ 0
SMARCA4-210ENST00000586892 OXER1Q8TDS5 423 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 TNPO1Q92973 898 aaKnown RBP15.07■□□□□ 0
SMARCA4-210ENST00000586892 ATP6V0A1Q93050 837 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 SCLYQ96I15 445 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 RNPC3Q96LT9 517 aaKnown RBP15.07■□□□□ 0
SMARCA4-210ENST00000586892 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.07■□□□□ 0
SMARCA4-210ENST00000586892 RNPEPQ9H4A4 650 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 MYH9P35579 1960 aaKnown RBP15.07■□□□□ 0
SMARCA4-210ENST00000586892 SCN5AQ14524 2016 aa15.07■□□□□ 0
SMARCA4-210ENST00000586892 IGKV6D-21A0A0A0MT36 114 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 MSH4O15457 936 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 PARNO95453 639 aaKnown RBP15.06■□□□□ 0
SMARCA4-210ENST00000586892 CCNE2O96020 404 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 IQCF3P0C7M6 154 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 MARK3P27448 753 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 MCM2P49736 904 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 ZNF200P98182 395 aaPredicted RBP15.06■□□□□ 0
SMARCA4-210ENST00000586892 TMEM240Q5SV17 173 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 MIS18BP1Q6P0N0 1132 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 ABHD15Q6UXT9 468 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 PIK3AP1Q6ZUJ8 805 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 C16orf59Q7L2K0 433 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 NEK8Q86SG6 692 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 DHX38Q92620 1227 aaKnown RBP15.06■□□□□ 0
SMARCA4-210ENST00000586892 MBOAT7Q96N66 472 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 PCYT2Q99447 389 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 RIT2Q99578 217 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 NAP1L4Q99733 375 aaKnown RBP15.06■□□□□ 0
SMARCA4-210ENST00000586892 SETD4Q9NVD3 440 aa15.06■□□□□ 0
SMARCA4-210ENST00000586892 TREHO43280 583 aa15.05■□□□□ -0
SMARCA4-210ENST00000586892 TDP2O95551 362 aa15.05■□□□□ -0
SMARCA4-210ENST00000586892 ACRP10323 421 aa15.05■□□□□ -0
SMARCA4-210ENST00000586892 CKBP12277 381 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms