RNA–Protein interactions for RNA: ENST00000585089.5

IFT20-214, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-214ENST00000585089 SETD4Q9NVD3 440 aa17.1■□□□□ 0.33
IFT20-214ENST00000585089 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
IFT20-214ENST00000585089 MYO10Q9HD67 2058 aa17.09■□□□□ 0.33
IFT20-214ENST00000585089 LGALS2P05162 132 aa17.09■□□□□ 0.33
IFT20-214ENST00000585089 GOLGA8HP0CJ92 632 aa17.09■□□□□ 0.33
IFT20-214ENST00000585089 TGFB3P10600 412 aa17.09■□□□□ 0.33
IFT20-214ENST00000585089 GHRP10912 638 aa17.09■□□□□ 0.33
IFT20-214ENST00000585089 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
IFT20-214ENST00000585089 CPVLQ9H3G5 476 aa17.09■□□□□ 0.33
IFT20-214ENST00000585089 PLXNA4Q9HCM2 1894 aa17.09■□□□□ 0.33
IFT20-214ENST00000585089 NOP56O00567 594 aaKnown RBP17.08■□□□□ 0.32
IFT20-214ENST00000585089 FOXP2O15409 715 aa17.08■□□□□ 0.32
IFT20-214ENST00000585089 RGS20O76081 388 aa17.08■□□□□ 0.32
IFT20-214ENST00000585089 CFBP00751 764 aa17.08■□□□□ 0.32
IFT20-214ENST00000585089 UBA1P22314 1058 aaKnown RBP17.08■□□□□ 0.32
IFT20-214ENST00000585089 UBALD2Q8IYN6 164 aa17.08■□□□□ 0.32
IFT20-214ENST00000585089 TMEM105Q8N8V8 129 aa17.08■□□□□ 0.32
IFT20-214ENST00000585089 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.32
IFT20-214ENST00000585089 PDCD2LQ9BRP1 358 aa17.08■□□□□ 0.32
IFT20-214ENST00000585089 CHRNA1P02708 482 aa17.07■□□□□ 0.32
IFT20-214ENST00000585089 SRGAP2BP0DMP2 458 aa17.07■□□□□ 0.32
IFT20-214ENST00000585089 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
IFT20-214ENST00000585089 SP2Q02086 613 aa17.07■□□□□ 0.32
IFT20-214ENST00000585089 KREMEN2Q8NCW0 462 aa17.07■□□□□ 0.32
IFT20-214ENST00000585089 ATP8B4Q8TF62 1192 aa17.07■□□□□ 0.32
IFT20-214ENST00000585089 USP26Q9BXU7 913 aa17.07■□□□□ 0.32
IFT20-214ENST00000585089 EHMT1Q9H9B1 1298 aa17.07■□□□□ 0.32
IFT20-214ENST00000585089 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
IFT20-214ENST00000585089 MTMR3Q13615 1198 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 LPIN1Q14693 890 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 RSPH3Q86UC2 560 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 VSIG10LQ86VR7 867 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 ADGRF4Q8IZF3 695 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 LMBR1Q8WVP7 490 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 CDCA3Q99618 268 aaPredicted RBP17.06■□□□□ 0.32
IFT20-214ENST00000585089 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
IFT20-214ENST00000585089 SORCS3Q9UPU3 1222 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 NR2E1Q9Y466 385 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 PCDHGC5Q9Y5F6 944 aa17.06■□□□□ 0.32
IFT20-214ENST00000585089 PER2O15055 1255 aa17.05■□□□□ 0.32
IFT20-214ENST00000585089 PPFIA3O75145 1194 aa17.05■□□□□ 0.32
IFT20-214ENST00000585089 HSD17B4P51659 736 aa17.05■□□□□ 0.32
IFT20-214ENST00000585089 ALX1Q15699 326 aa17.05■□□□□ 0.32
IFT20-214ENST00000585089 QRICH1Q2TAL8 776 aa17.05■□□□□ 0.32
IFT20-214ENST00000585089 PAN2Q504Q3 1202 aaKnown RBP17.05■□□□□ 0.32
IFT20-214ENST00000585089 ASTLQ6HA08 431 aaPredicted RBP17.05■□□□□ 0.32
IFT20-214ENST00000585089 NPAS4Q8IUM7 802 aa17.05■□□□□ 0.32
IFT20-214ENST00000585089 DOCK5Q9H7D0 1870 aa17.05■□□□□ 0.32
IFT20-214ENST00000585089 MED19A0JLT2 244 aaPredicted RBP17.04■□□□□ 0.32
IFT20-214ENST00000585089 STAG3L1P0CL83 205 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 SP100P23497 879 aaPredicted RBP17.04■□□□□ 0.32
IFT20-214ENST00000585089 CCND2P30279 289 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
IFT20-214ENST00000585089 UBE3AQ05086 875 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 PGM5Q15124 567 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 VPS53Q5VIR6 699 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 TAF2Q6P1X5 1199 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 DGLUCYQ7Z3D6 616 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 MIER1Q8N108 512 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 MFSD1Q9H3U5 465 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 TSHZ2Q9NRE2 1034 aa17.04■□□□□ 0.32
IFT20-214ENST00000585089 TTC41PQ6P2S7 1318 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 NRCAMQ92823 1304 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 ADAM17P78536 824 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 DUSP6Q16828 381 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 TSHZ1Q6ZSZ6 1077 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 STOX1Q6ZVD7 989 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 VN1R2Q8NFZ6 395 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 VAT1LQ9HCJ6 419 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 MAP3K20Q9NYL2 800 aaKnown RBP17.03■□□□□ 0.32
IFT20-214ENST00000585089 PCDHB12Q9Y5F1 795 aa17.03■□□□□ 0.32
IFT20-214ENST00000585089 CCER2I3L3R5 266 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 TECP42680 631 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 CLCN5P51795 746 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 MGAT3Q09327 533 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 NEDD9Q14511 834 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 GNPTABQ3T906 1256 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 ASPRV1Q53RT3 343 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 FBXO47Q5MNV8 452 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 SPOUT1Q5T280 376 aaKnown RBP17.02■□□□□ 0.32
IFT20-214ENST00000585089 UTP14CQ5TAP6 766 aaKnown RBP17.02■□□□□ 0.32
IFT20-214ENST00000585089 PDE12Q6L8Q7 609 aaKnown RBP17.02■□□□□ 0.32
IFT20-214ENST00000585089 ANKRD54Q6NXT1 300 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 TRIM50Q86XT4 487 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 IL31RAQ8NI17 732 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
IFT20-214ENST00000585089 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 FTHL17Q9BXU8 183 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 S1PR5Q9H228 398 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 AAASQ9NRG9 546 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 LRFN2Q9ULH4 789 aa17.02■□□□□ 0.32
IFT20-214ENST00000585089 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.32
IFT20-214ENST00000585089 EP300Q09472 2414 aaPredicted RBP17.02■□□□□ 0.32
IFT20-214ENST00000585089 BRD1O95696 1058 aa17.01■□□□□ 0.31
IFT20-214ENST00000585089 FGAP02671 866 aa17.01■□□□□ 0.31
IFT20-214ENST00000585089 PCP11498 1178 aaKnown RBP17.01■□□□□ 0.31
IFT20-214ENST00000585089 GHRHRQ02643 423 aa17.01■□□□□ 0.31
IFT20-214ENST00000585089 METTL7BQ6UX53 244 aa17.01■□□□□ 0.31
IFT20-214ENST00000585089 TMEM184AQ6ZMB5 413 aa17.01■□□□□ 0.31
IFT20-214ENST00000585089 RUFY4Q6ZNE9 571 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms