RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 TROAPQ12815 778 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 TRAF1Q13077 416 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 PTPROQ16827 1216 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 SAMD11Q96NU1 681 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 RTEL1Q9NZ71 1219 aa23.59■■□□□ 1.37
SRSF1-206ENST00000583741 IFIT3O14879 490 aaKnown RBP23.58■■□□□ 1.37
SRSF1-206ENST00000583741 GPM6BQ13491 265 aa23.58■■□□□ 1.37
SRSF1-206ENST00000583741 NEDD9Q14511 834 aa23.58■■□□□ 1.37
SRSF1-206ENST00000583741 TIGD5Q53EQ6 642 aa23.58■■□□□ 1.37
SRSF1-206ENST00000583741 TMEM192Q8IY95 271 aa23.58■■□□□ 1.37
SRSF1-206ENST00000583741 BANK1Q8NDB2 785 aa23.58■■□□□ 1.37
SRSF1-206ENST00000583741 IFIH1Q9BYX4 1025 aaKnown RBP23.58■■□□□ 1.37
SRSF1-206ENST00000583741 SSTR3P32745 418 aaPredicted RBP23.57■■□□□ 1.36
SRSF1-206ENST00000583741 ADAM17P78536 824 aa23.57■■□□□ 1.36
SRSF1-206ENST00000583741 PTH1RQ03431 593 aa23.57■■□□□ 1.36
SRSF1-206ENST00000583741 TRDNQ13061 729 aa23.57■■□□□ 1.36
SRSF1-206ENST00000583741 TCEAL5Q5H9L2 206 aa23.57■■□□□ 1.36
SRSF1-206ENST00000583741 LMBR1Q8WVP7 490 aa23.57■■□□□ 1.36
SRSF1-206ENST00000583741 PIBF1Q8WXW3 757 aa23.57■■□□□ 1.36
SRSF1-206ENST00000583741 RBM19Q9Y4C8 960 aaKnown RBP23.57■■□□□ 1.36
SRSF1-206ENST00000583741 FIBPO43427 364 aa23.56■■□□□ 1.36
SRSF1-206ENST00000583741 STAM2O75886 525 aa23.56■■□□□ 1.36
SRSF1-206ENST00000583741 RBM25P49756 843 aaKnown RBP23.56■■□□□ 1.36
SRSF1-206ENST00000583741 GNAT1P11488 350 aa23.56■■□□□ 1.36
SRSF1-206ENST00000583741 ARHGAP4P98171 946 aa23.56■■□□□ 1.36
SRSF1-206ENST00000583741 SP4Q02446 784 aa23.56■■□□□ 1.36
SRSF1-206ENST00000583741 COL19A1Q14993 1142 aa23.56■■□□□ 1.36
SRSF1-206ENST00000583741 FAM26DQ5JW98 314 aa23.56■■□□□ 1.36
SRSF1-206ENST00000583741 UTP14CQ5TAP6 766 aaKnown RBP23.56■■□□□ 1.36
SRSF1-206ENST00000583741 WTAPQ15007 396 aa23.55■■□□□ 1.36
SRSF1-206ENST00000583741 APBB2Q92870 758 aa23.55■■□□□ 1.36
SRSF1-206ENST00000583741 MAP4K1Q92918 833 aa23.55■■□□□ 1.36
SRSF1-206ENST00000583741 PABPC5Q96DU9 382 aaKnown RBP23.55■■□□□ 1.36
SRSF1-206ENST00000583741 ZNF215Q9UL58 517 aaPredicted RBP23.55■■□□□ 1.36
SRSF1-206ENST00000583741 ERICH2A1L162 156 aa23.54■■□□□ 1.36
SRSF1-206ENST00000583741 PRR33A8MZF0 331 aa23.54■■□□□ 1.36
SRSF1-206ENST00000583741 CHRNA1P02708 482 aa23.54■■□□□ 1.36
SRSF1-206ENST00000583741 PUS10Q3MIT2 529 aaKnown RBP23.54■■□□□ 1.36
SRSF1-206ENST00000583741 USP17L6PQ6QN14 398 aa23.54■■□□□ 1.36
SRSF1-206ENST00000583741 NSUN3Q9H649 340 aaKnown RBP23.54■■□□□ 1.36
SRSF1-206ENST00000583741 U3KPZ7 1027 aaPredicted RBP23.54■■□□□ 1.36
SRSF1-206ENST00000583741 LINC00271P0C7V0 271 aa23.53■■□□□ 1.36
SRSF1-206ENST00000583741 ANTXR2P58335 489 aa23.53■■□□□ 1.36
SRSF1-206ENST00000583741 PCNX4Q63HM2 1172 aa23.53■■□□□ 1.36
SRSF1-206ENST00000583741 RUFY4Q6ZNE9 571 aa23.53■■□□□ 1.36
SRSF1-206ENST00000583741 EP400NLQ6ZTU2 488 aa23.53■■□□□ 1.36
SRSF1-206ENST00000583741 E7EWF7 191 aa23.52■■□□□ 1.36
SRSF1-206ENST00000583741 RALYLQ86SE5 291 aaKnown RBP23.52■■□□□ 1.36
SRSF1-206ENST00000583741 IL17RAQ96F46 866 aa23.52■■□□□ 1.36
SRSF1-206ENST00000583741 SENP7Q9BQF6 1050 aa23.52■■□□□ 1.36
SRSF1-206ENST00000583741 RC3H2Q9HBD1 1191 aaKnown RBP23.52■■□□□ 1.36
SRSF1-206ENST00000583741 RBM8AQ9Y5S9 174 aaKnown RBP23.52■■□□□ 1.36
SRSF1-206ENST00000583741 NRCAMQ92823 1304 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 MEIS2O14770 477 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 GHRP10912 638 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 HSPA4P34932 840 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 CTNNB1P35222 781 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 SART3Q15020 963 aaKnown RBP23.51■■□□□ 1.35
SRSF1-206ENST00000583741 CATIPQ7Z7H3 387 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 FIBCD1Q8N539 461 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 NCOA7Q8NI08 942 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 SMARCC2Q8TAQ2 1214 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 MYL10Q9BUA6 226 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 EHMT1Q9H9B1 1298 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 CLDND1Q9NY35 253 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 TTC3P53804 2025 aa23.51■■□□□ 1.35
SRSF1-206ENST00000583741 ALADP13716 330 aa23.5■■□□□ 1.35
SRSF1-206ENST00000583741 TCF7P36402 384 aaPredicted RBP23.5■■□□□ 1.35
SRSF1-206ENST00000583741 ZP2Q05996 745 aa23.5■■□□□ 1.35
SRSF1-206ENST00000583741 IGDCC4Q8TDY8 1250 aa23.5■■□□□ 1.35
SRSF1-206ENST00000583741 C5orf67F2Z3F1 127 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 PIK3CDO00329 1044 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 ATP9AO75110 1047 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 LTBRP36941 435 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 MGAT3Q09327 533 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 LPIN1Q14693 890 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 RPAINQ86UA6 219 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 SPZ1Q9BXG8 430 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 KIAA1671Q9BY89 1806 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 ADGRA3Q8IWK6 1321 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 GRM6O15303 877 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 NECTIN1Q15223 517 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 XRRA1Q6P2D8 792 aa23.49■■□□□ 1.35
SRSF1-206ENST00000583741 MB21D2Q8IYB1 491 aaPredicted RBP23.49■■□□□ 1.35
SRSF1-206ENST00000583741 DCXO43602 365 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 KCNA2P16389 499 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 BMPR1AP36894 532 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 PPFIA1Q13136 1202 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 TAF2Q6P1X5 1199 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 NLRX1Q86UT6 975 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 ZNF654Q8IZM8 581 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 CUL5Q93034 780 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 RRP36Q96EU6 259 aaKnown RBP23.48■■□□□ 1.35
SRSF1-206ENST00000583741 UIMC1Q96RL1 719 aa23.48■■□□□ 1.35
SRSF1-206ENST00000583741 C11orf84Q9BUA3 381 aaPredicted RBP23.48■■□□□ 1.35
SRSF1-206ENST00000583741 LOXHD1Q8IVV2 1947 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 GSTTP1A0A1W2PQM5 241 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 POTEB3A0JP26 581 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 ITGB5P18084 799 aa23.47■■□□□ 1.35
SRSF1-206ENST00000583741 MARK3P27448 753 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms