RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 SFNP31947 248 aa15.37■□□□□ 0.05
ITGB4-209ENST00000583327 GRK4P32298 578 aa15.37■□□□□ 0.05
ITGB4-209ENST00000583327 LAMC2Q13753 1193 aa15.37■□□□□ 0.05
ITGB4-209ENST00000583327 NFKBIBQ15653 356 aa15.37■□□□□ 0.05
ITGB4-209ENST00000583327 CTU1Q7Z7A3 348 aaKnown RBP15.37■□□□□ 0.05
ITGB4-209ENST00000583327 DHX37Q8IY37 1157 aaKnown RBP15.37■□□□□ 0.05
ITGB4-209ENST00000583327 SYMPKQ92797 1274 aaKnown RBP15.37■□□□□ 0.05
ITGB4-209ENST00000583327 POLR3CQ9BUI4 534 aaPredicted RBP15.37■□□□□ 0.05
ITGB4-209ENST00000583327 JPH1Q9HDC5 661 aaPredicted RBP15.37■□□□□ 0.05
ITGB4-209ENST00000583327 PKD2L1Q9P0L9 805 aa15.37■□□□□ 0.05
ITGB4-209ENST00000583327 DUSP11O75319 330 aaKnown RBP15.36■□□□□ 0.05
ITGB4-209ENST00000583327 SLITRK3O94933 977 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 GH1P01241 217 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
ITGB4-209ENST00000583327 AKR1A1P14550 325 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 ACTR2P61160 394 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 SNW1Q13573 536 aaKnown RBP15.36■□□□□ 0.05
ITGB4-209ENST00000583327 HSDL1Q3SXM5 330 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 FMR1NBQ8N0W7 255 aaPredicted RBP15.36■□□□□ 0.05
ITGB4-209ENST00000583327 KCTD17Q8N5Z5 321 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 SEPT1Q8WYJ6 367 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 MRPS27Q92552 414 aaKnown RBP15.36■□□□□ 0.05
ITGB4-209ENST00000583327 GPR20Q99678 358 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 EIF2AK1Q9BQI3 630 aaKnown RBP15.36■□□□□ 0.05
ITGB4-209ENST00000583327 GOLPH3LQ9H4A5 285 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 DISC1Q9NRI5 854 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 PCDHA10Q9Y5I2 948 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 HTTP42858 3142 aa15.36■□□□□ 0.05
ITGB4-209ENST00000583327 A0A087X0B3 334 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 A6NJR5 290 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 DDX11L8A8MPP1 907 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 WDR64B1ANS9 1081 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 CTAGE5O15320 804 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 MED24O75448 989 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 LGR5O75473 907 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
ITGB4-209ENST00000583327 PFKFB1P16118 471 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 PTGS1P23219 599 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 UBA7P41226 1012 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 JAK3P52333 1124 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
ITGB4-209ENST00000583327 ECM1Q16610 540 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 GJC2Q5T442 439 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-209ENST00000583327 NCAPH2Q6IBW4 605 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 CABP7Q86V35 215 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 CATSPER3Q86XQ3 398 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 NEK9Q8TD19 979 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 PNMA5Q96PV4 448 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 PCYT2Q99447 389 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 UPF3AQ9H1J1 476 aaKnown RBP15.35■□□□□ 0.05
ITGB4-209ENST00000583327 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 TUFT1Q9NNX1 390 aa15.35■□□□□ 0.05
ITGB4-209ENST00000583327 A0A1B0GVL5 298 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 GOLGA6L4A6NEF3 574 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 DDX39AO00148 427 aaKnown RBP15.34■□□□□ 0.05
ITGB4-209ENST00000583327 STBD1O95210 358 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 LYPLA2O95372 231 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 INHAP05111 366 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 SUPT20HL2P0C7V6 817 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 LIG1P18858 919 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 PTMSP20962 102 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 CCND3P30281 292 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-209ENST00000583327 NDUFA8P51970 172 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 GJA9P57773 515 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 GRB10Q13322 594 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 E2F4Q16254 413 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 TMEM119Q4V9L6 283 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 KRT79Q5XKE5 535 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 FBXO46Q6PJ61 603 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-209ENST00000583327 MIER3Q7Z3K6 550 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 FSIP1Q8NA03 581 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 PPTC7Q8NI37 304 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 GPT2Q8TD30 523 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 AFAP1L1Q8TED9 768 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 LRRC15Q8TF66 581 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 PRDM10Q9NQV6 1147 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 FAM13BQ9NYF5 915 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 RGL1Q9NZL6 768 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 KCNH3Q9ULD8 1083 aa15.34■□□□□ 0.05
ITGB4-209ENST00000583327 MAFBQ9Y5Q3 323 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-209ENST00000583327 DYNC1LI2O43237 492 aaPredicted RBP15.33■□□□□ 0.04
ITGB4-209ENST00000583327 PPFIA4O75335 1185 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 PSAPP07602 524 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 NAALADL2Q58DX5 795 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 LHX8Q68G74 356 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 ERMNQ8TAM6 284 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 AFG1LQ8WV93 481 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 DYDC2Q96IM9 177 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 SPATA33Q96N06 139 aa15.33■□□□□ 0.04
ITGB4-209ENST00000583327 WRAP73Q9P2S5 460 aaPredicted RBP15.33■□□□□ 0.04
ITGB4-209ENST00000583327 CHMP2AO43633 222 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 NR1I2O75469 434 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 XRCC6P12956 609 aaKnown RBP eCLIP15.32■□□□□ 0.04
ITGB4-209ENST00000583327 ATP4AP20648 1035 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 CCT6AP40227 531 aaKnown RBP15.32■□□□□ 0.04
ITGB4-209ENST00000583327 QARSP47897 775 aaKnown RBP15.32■□□□□ 0.04
ITGB4-209ENST00000583327 KARSQ15046 597 aaKnown RBP15.32■□□□□ 0.04
ITGB4-209ENST00000583327 HAUS3Q68CZ6 603 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 MIS18BP1Q6P0N0 1132 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms