RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	SI	P14410	1827 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	KCNA2	P16389	499 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ITGB5	P18084	799 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	COL9A1	P20849	921 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	SMARCA1	P28370	1054 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	TCF7	P36402	384 aa	Predicted RBP	13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	MKRN4P	Q13434	485 aa	Predicted RBP	13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	XRRA1	Q6P2D8	792 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	TMTC3	Q6ZXV5	915 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	TMTC2	Q8N394	836 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	FBXO22	Q8NEZ5	403 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ZBTB10	Q96DT7	871 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	TCEANC2	Q96MN5	208 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	YME1L1	Q96TA2	773 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	SENP7	Q9BQF6	1050 aa		13.36	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	SPDYE3	A6NKU9	549 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	CALM1	P0DP23	149 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	CALM2	P0DP24	149 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	CALM3	P0DP25	149 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	GHR	P10912	638 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	LIFR	P42702	1097 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	IGBP1	P78318	339 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	ADAM17	P78536	824 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	MTMR1	Q13613	665 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	NECTIN1	Q15223	517 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	FANCB	Q8NB91	859 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	GPRASP2	Q96D09	838 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	PGBD1	Q96JS3	809 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	MTA3	Q9BTC8	594 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	IFIH1	Q9BYX4	1025 aa	Known RBP	13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	PCDHA6	Q9UN73	950 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	PCDHA8	Q9Y5H6	950 aa		13.35	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	GSTTP1	A0A1W2PQM5	241 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	CAND2	O75155	1236 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	CHRNA1	P02708	482 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	HTRA4	P83105	476 aa	Predicted RBP	13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	PPFIA1	Q13136	1202 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	WWC2	Q6AWC2	1192 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	SEPT1	Q8WYJ6	367 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	GLG1	Q92896	1179 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	TOP1MT	Q969P6	601 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	UBIAD1	Q9Y5Z9	338 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	NRCAM	Q92823	1304 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	KAT6A	Q92794	2004 aa		13.34	□□□□□ -0.27
CDK5RAP3-223	ENST00000582114	GRIK4	Q16099	956 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	EPC2	Q52LR7	807 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TYW1B	Q6NUM6	668 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	SYNE3	Q6ZMZ3	975 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CYP2W1	Q8TAV3	490 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	SP7	Q8TDD2	431 aa	Predicted RBP	13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	DNAJB3	Q8WWF6	145 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CDHR1	Q96JP9	859 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	JADE2	Q9NQC1	790 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	LMCD1	Q9NZU5	365 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TUBE1	Q9UJT0	475 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CNTNAP5	Q8WYK1	1306 aa		13.33	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CSPG5	O95196	566 aa		13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	KCNA5	P22460	613 aa		13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	NAPA	P54920	295 aa		13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	FAM26D	Q5JW98	314 aa		13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	APOA5	Q6Q788	366 aa		13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	SGMS1	Q86VZ5	419 aa		13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	UBE2Z	Q9H832	354 aa	Predicted RBP	13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	ERAP1	Q9NZ08	941 aa		13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	BRPF3	Q9ULD4	1205 aa		13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.32	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	MGAT3	Q09327	533 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TMEM62	Q0P6H9	643 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	GPM6B	Q13491	265 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	LPIN1	Q14693	890 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	RTN1	Q16799	776 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	ADCK5	Q3MIX3	580 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	MARCH8	Q5T0T0	291 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	EP400NL	Q6ZTU2	488 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TMEM192	Q8IY95	271 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TRAPPC12	Q8WVT3	735 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	APBB2	Q92870	758 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	NEK1	Q96PY6	1258 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	UIMC1	Q96RL1	719 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	PCYT2	Q99447	389 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	SMARCAD1	Q9H4L7	1026 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	EPHX3	Q9H6B9	360 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	EHMT1	Q9H9B1	1298 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	JPH1	Q9HDC5	661 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TMEM260	Q9NX78	707 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	TRPC6	Q9Y210	931 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	CDY2A	Q9Y6F7	541 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	NCOR1	O75376	2440 aa		13.31	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	BRWD1	Q9NSI6	2320 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	NLRC5	Q86WI3	1866 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	GOLGA8A	A7E2F4	631 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	GOLGA8B	A8MQT2	603 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	DDX39A	O00148	427 aa	Known RBP	13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	ZBTB43	O43298	467 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	AR	P10275	920 aa		13.3	□□□□□ -0.28
CDK5RAP3-223	ENST00000582114	INSRR	P14616	1297 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms