RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-208	ENST00000580019	CCDC85C	A6NKD9	419 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	RIMBP3B	A6NNM3	1639 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019		H0Y8X5	98 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	SH3BP5	O60239	455 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	PLIN1	O60240	522 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	NUDT3	O95989	172 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	CENPB	P07199	599 aa	Predicted RBP	4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	KRT4	P19013	534 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	EIF4A3	P38919	411 aa	Known RBP	4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	SOX9	P48436	509 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	MLLT6	P55198	1093 aa	Predicted RBP	4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	EXOSC10	Q01780	885 aa	Known RBP	4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	SYCE2	Q6PIF2	218 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	KRT26	Q7Z3Y9	468 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	DCP2	Q8IU60	420 aa	Known RBP	4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	LILRB2	Q8N423	598 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	SGSM3	Q96HU1	749 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	LRRC37B	Q96QE4	947 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	DNAJC7	Q99615	494 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	MTA3	Q9BTC8	594 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	IER2	Q9BTL4	223 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	NT5C1A	Q9BXI3	368 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	GINM1	Q9NU53	330 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	TMEM260	Q9NX78	707 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	RIMBP3	Q9UFD9	1639 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	SIT1	Q9Y3P8	196 aa		4.08	□□□□□ -1.76
KPNB1-208	ENST00000580019	THOC2	Q8NI27	1593 aa	Known RBP	4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	TMEM191C	A6NGB0	347 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	MINDY4B	A8MYZ0	360 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	GBP2	P32456	591 aa	Predicted RBP	4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	RBM10	P98175	930 aa	Known RBP	4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	LMNB2	Q03252	620 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	HDAC1	Q13547	482 aa	Predicted RBP	4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	COLEC12	Q5KU26	742 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	PRIMA1	Q86XR5	153 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	SYNPO	Q8N3V7	929 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	ANAPC16	Q96DE5	110 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	CLIC6	Q96NY7	704 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	FCRL3	Q96P31	734 aa	Predicted RBP	4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	TERF2IP	Q9NYB0	399 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	ADAM29	Q9UKF5	820 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	COMMD10	Q9Y6G5	202 aa		4.07	□□□□□ -1.76
KPNB1-208	ENST00000580019	PDPK1	O15530	556 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	CAND2	O75155	1236 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	VIL1	P09327	827 aa	Known RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	ACRV1	P26436	265 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	CAMK2G	Q13555	558 aa	Predicted RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	RASGRF1	Q13972	1273 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	UBE4A	Q14139	1066 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	TCEA2	Q15560	299 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019		Q6ZPA2	131 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019		Q6ZSN1	163 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	RALYL	Q86SE5	291 aa	Known RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	TAX1BP1	Q86VP1	789 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	WDR75	Q8IWA0	830 aa	Known RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	TEX2	Q8IWB9	1127 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	NTN5	Q8WTR8	489 aa	Predicted RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	FAM89A	Q96GI7	184 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	TMEM74	Q96NL1	305 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	AP5M1	Q9H0R1	490 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	ADAMTS1	Q9UHI8	967 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	REXO2	Q9Y3B8	237 aa	Known RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	MSRB2	Q9Y3D2	182 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	EID1	Q9Y6B2	187 aa		4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.06	□□□□□ -1.76
KPNB1-208	ENST00000580019	ALG1L2	C9J202	215 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	NTRK1	P04629	796 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	CNGA1	P29973	690 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	NKX3-2	P78367	333 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	C4orf46	Q504U0	113 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	LCE1E	Q5T753	118 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	LCE1A	Q5T7P2	110 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	OVOS1	Q6IE37	1185 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	MICALCL	Q6ZW33	695 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	REC114	Q7Z4M0	266 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	FAM126B	Q8IXS8	530 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	C7orf61	Q8IZ16	206 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	FUK	Q8N0W3	1084 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	PNISR	Q8TF01	805 aa	Known RBP	4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	ZSWIM3	Q96MP5	696 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	WRNIP1	Q96S55	665 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	APBA2	Q99767	749 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	CNNM2	Q9H8M5	875 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	KANSL2	Q9H9L4	492 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	PLAA	Q9Y263	795 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	ATP8A1	Q9Y2Q0	1164 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	SLC4A7	Q9Y6M7	1214 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	NES	P48681	1621 aa		4.05	□□□□□ -1.76
KPNB1-208	ENST00000580019	SMAD7	O15105	426 aa	Known RBP	4.04	□□□□□ -1.76
KPNB1-208	ENST00000580019	PPP1R11	O60927	126 aa	Predicted RBP	4.04	□□□□□ -1.76
KPNB1-208	ENST00000580019	PPFIA4	O75335	1185 aa		4.04	□□□□□ -1.76
KPNB1-208	ENST00000580019	KRT18	P05783	430 aa	Known RBP	4.04	□□□□□ -1.76
KPNB1-208	ENST00000580019	IFNGR1	P15260	489 aa		4.04	□□□□□ -1.76
KPNB1-208	ENST00000580019	STAT5A	P42229	794 aa		4.04	□□□□□ -1.76

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