RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 DEXIO95424 95 aa30.57■■■□□ 2.48
LINC00271-205ENST00000579339 CKBP12277 381 aa30.57■■■□□ 2.48
LINC00271-205ENST00000579339 SELPP16109 830 aa30.57■■■□□ 2.48
LINC00271-205ENST00000579339 ITGB3BPQ13352 177 aaPredicted RBP30.57■■■□□ 2.48
LINC00271-205ENST00000579339 TRIM71Q2Q1W2 868 aaKnown RBP30.57■■■□□ 2.48
LINC00271-205ENST00000579339 LRRC8DQ7L1W4 858 aa30.57■■■□□ 2.48
LINC00271-205ENST00000579339 BICD2Q8TD16 824 aa30.57■■■□□ 2.48
LINC00271-205ENST00000579339 SDF4Q9BRK5 362 aa30.57■■■□□ 2.48
LINC00271-205ENST00000579339 SETD4Q9NVD3 440 aa30.57■■■□□ 2.48
LINC00271-205ENST00000579339 ZBBXA8MT70 800 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 TREHO43280 583 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 PFKFB2O60825 505 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 EIF5BO60841 1220 aaKnown RBP30.56■■■□□ 2.48
LINC00271-205ENST00000579339 PFKMP08237 780 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 MARK3P27448 753 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 HOXC8P31273 242 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 RFC2P35250 354 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 MCTP2Q6DN12 878 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 PLA2G4DQ86XP0 818 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 ATP6V0A1Q93050 837 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 FTOQ9C0B1 505 aaKnown RBP eCLIP30.56■■■□□ 2.48
LINC00271-205ENST00000579339 MTIF3Q9H2K0 278 aaKnown RBP30.56■■■□□ 2.48
LINC00271-205ENST00000579339 SH3GLB2Q9NR46 395 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 SLC9A2Q9UBY0 812 aa30.56■■■□□ 2.48
LINC00271-205ENST00000579339 NFASCO94856 1347 aa30.55■■■□□ 2.48
LINC00271-205ENST00000579339 CYP3A4P08684 503 aa30.55■■■□□ 2.48
LINC00271-205ENST00000579339 RBL2Q08999 1139 aa30.55■■■□□ 2.48
LINC00271-205ENST00000579339 SERINC5Q86VE9 423 aa30.55■■■□□ 2.48
LINC00271-205ENST00000579339 IGLV3-22A0A075B6J6 115 aa30.54■■■□□ 2.48
LINC00271-205ENST00000579339 DDX39AO00148 427 aaKnown RBP30.54■■■□□ 2.48
LINC00271-205ENST00000579339 DNAJB2P25686 324 aa30.54■■■□□ 2.48
LINC00271-205ENST00000579339 PBX2P40425 430 aa30.54■■■□□ 2.48
LINC00271-205ENST00000579339 GPNMBQ14956 572 aa30.54■■■□□ 2.48
LINC00271-205ENST00000579339 ANKRD1Q15327 319 aa30.54■■■□□ 2.48
LINC00271-205ENST00000579339 ZNF618Q5T7W0 954 aa30.54■■■□□ 2.48
LINC00271-205ENST00000579339 NIPA1Q7RTP0 329 aa30.54■■■□□ 2.48
LINC00271-205ENST00000579339 GLG1Q92896 1179 aa30.54■■■□□ 2.48
LINC00271-205ENST00000579339 TTYH1Q9H313 450 aaPredicted RBP30.54■■■□□ 2.48
LINC00271-205ENST00000579339 TET1Q8NFU7 2136 aa30.53■■■□□ 2.48
LINC00271-205ENST00000579339 LARGE1O95461 756 aa30.53■■■□□ 2.48
LINC00271-205ENST00000579339 ACTR2P61160 394 aa30.53■■■□□ 2.48
LINC00271-205ENST00000579339 C8orf34Q49A92 452 aa30.53■■■□□ 2.48
LINC00271-205ENST00000579339 TRAF7Q6Q0C0 670 aa30.53■■■□□ 2.48
LINC00271-205ENST00000579339 LMBR1Q8WVP7 490 aa30.53■■■□□ 2.48
LINC00271-205ENST00000579339 GUCD1Q96NT3 240 aa30.53■■■□□ 2.48
LINC00271-205ENST00000579339 PCYT2Q99447 389 aa30.53■■■□□ 2.48
LINC00271-205ENST00000579339 CDKL5O76039 1030 aa30.52■■■□□ 2.48
LINC00271-205ENST00000579339 THPOP40225 353 aa30.52■■■□□ 2.48
LINC00271-205ENST00000579339 NEK4P51957 841 aa30.52■■■□□ 2.48
LINC00271-205ENST00000579339 NECAB1Q8N987 351 aa30.52■■■□□ 2.48
LINC00271-205ENST00000579339 PBX4Q9BYU1 374 aa30.52■■■□□ 2.48
LINC00271-205ENST00000579339 SEMA6BQ9H3T3 888 aa30.52■■■□□ 2.48
LINC00271-205ENST00000579339 PCDHA4Q9UN74 947 aa30.52■■■□□ 2.48
LINC00271-205ENST00000579339 SLC4A7Q9Y6M7 1214 aa30.52■■■□□ 2.48
LINC00271-205ENST00000579339 NBNO60934 754 aa30.51■■■□□ 2.47
LINC00271-205ENST00000579339 CTDNEP1O95476 244 aa30.51■■■□□ 2.47
LINC00271-205ENST00000579339 SMARCAD1Q9H4L7 1026 aa30.51■■■□□ 2.47
LINC00271-205ENST00000579339 ERAP1Q9NZ08 941 aa30.51■■■□□ 2.47
LINC00271-205ENST00000579339 CDH23Q9H251 3354 aa30.51■■■□□ 2.47
LINC00271-205ENST00000579339 EMSYQ7Z589 1322 aa30.5■■■□□ 2.47
LINC00271-205ENST00000579339 EDIL3O43854 480 aa30.5■■■□□ 2.47
LINC00271-205ENST00000579339 LGR5O75473 907 aa30.5■■■□□ 2.47
LINC00271-205ENST00000579339 PPFIA1Q13136 1202 aa30.5■■■□□ 2.47
LINC00271-205ENST00000579339 ME3Q16798 604 aa30.5■■■□□ 2.47
LINC00271-205ENST00000579339 PRR16Q569H4 304 aa30.5■■■□□ 2.47
LINC00271-205ENST00000579339 TIFAQ96CG3 184 aa30.5■■■□□ 2.47
LINC00271-205ENST00000579339 KCNJ14Q9UNX9 436 aa30.5■■■□□ 2.47
LINC00271-205ENST00000579339 CCNE2O96020 404 aa30.49■■■□□ 2.47
LINC00271-205ENST00000579339 GNAT1P11488 350 aa30.49■■■□□ 2.47
LINC00271-205ENST00000579339 ACTN1P12814 892 aa30.49■■■□□ 2.47
LINC00271-205ENST00000579339 MBTPS1Q14703 1052 aa30.49■■■□□ 2.47
LINC00271-205ENST00000579339 NPY5RQ15761 445 aa30.49■■■□□ 2.47
LINC00271-205ENST00000579339 BLIDQ8IZY5 108 aa30.49■■■□□ 2.47
LINC00271-205ENST00000579339 ZNF577Q9BSK1 485 aa30.49■■■□□ 2.47
LINC00271-205ENST00000579339 IPO5O00410 1097 aaKnown RBP30.48■■■□□ 2.47
LINC00271-205ENST00000579339 DHX15O43143 795 aaKnown RBP30.48■■■□□ 2.47
LINC00271-205ENST00000579339 CTSHP09668 335 aa30.48■■■□□ 2.47
LINC00271-205ENST00000579339 RABGGTBP53611 331 aa30.48■■■□□ 2.47
LINC00271-205ENST00000579339 ADAM17P78536 824 aa30.48■■■□□ 2.47
LINC00271-205ENST00000579339 SETQ01105 290 aaPredicted RBP30.48■■■□□ 2.47
LINC00271-205ENST00000579339 TCTN1Q2MV58 587 aa30.48■■■□□ 2.47
LINC00271-205ENST00000579339 AZI2Q9H6S1 392 aa30.48■■■□□ 2.47
LINC00271-205ENST00000579339 GJB4Q9NTQ9 266 aa30.48■■■□□ 2.47
LINC00271-205ENST00000579339 NRCAMQ92823 1304 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 STK36Q9NRP7 1315 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 COL6A3P12111 3177 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 CIITAP33076 1130 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 GRIK4Q16099 956 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 DAGLBQ8NCG7 672 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 TBCKQ8TEA7 893 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 GTF3C6Q969F1 213 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 LENG9Q96B70 501 aa30.47■■■□□ 2.47
LINC00271-205ENST00000579339 RSPH10B2B2RC85 870 aa30.46■■■□□ 2.47
LINC00271-205ENST00000579339 CXCL10P02778 98 aa30.46■■■□□ 2.47
LINC00271-205ENST00000579339 RSPH10BP0C881 870 aa30.46■■■□□ 2.47
LINC00271-205ENST00000579339 ATP2A2P16615 1042 aaKnown RBP30.46■■■□□ 2.47
LINC00271-205ENST00000579339 IGBP1P78318 339 aa30.46■■■□□ 2.47
LINC00271-205ENST00000579339 RUFY4Q6ZNE9 571 aa30.46■■■□□ 2.47
LINC00271-205ENST00000579339 ORC3Q9UBD5 711 aaPredicted RBP30.46■■■□□ 2.47
LINC00271-205ENST00000579339 M0R2N6 131 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms