RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 P2RX5Q93086 422 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 PPP2R3CQ969Q6 453 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 KIF12Q96FN5 646 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 JMJD4Q9H9V9 463 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 MLXIPQ9HAP2 919 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 CLEC1BQ9P126 229 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 PLAGL2Q9UPG8 496 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 PLXNA3P51805 1871 aa10.13□□□□□ -0.79
BRIP1-204ENST00000579028 TTC3P53804 2025 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 WDFY4Q6ZS81 3184 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 DGKIO75912 1065 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 CHRNA1P02708 482 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 NT5C2P49902 561 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 RRP1P56182 461 aaKnown RBP10.12□□□□□ -0.79
BRIP1-204ENST00000579028 BTG3Q14201 252 aaPredicted RBP10.12□□□□□ -0.79
BRIP1-204ENST00000579028 MCMDC2Q4G0Z9 681 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 CCDC178Q5BJE1 867 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 ADGRD2Q7Z7M1 963 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 IL31RAQ8NI17 732 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 ESR2Q92731 530 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
BRIP1-204ENST00000579028 EVI5LQ96CN4 794 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 ASIC4Q96FT7 647 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 ZKSCAN3Q9BRR0 538 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 AMNQ9BXJ7 453 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 USP26Q9BXU7 913 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 RNF41Q9H4P4 317 aaPredicted RBP10.12□□□□□ -0.79
BRIP1-204ENST00000579028 EHMT1Q9H9B1 1298 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 SETD4Q9NVD3 440 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 FAM86C1Q9NVL1 165 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 USP15Q9Y4E8 981 aaPredicted RBP10.12□□□□□ -0.79
BRIP1-204ENST00000579028 KIAA1671Q9BY89 1806 aa10.12□□□□□ -0.79
BRIP1-204ENST00000579028 NEDD4P46934 1319 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 A0A0D9SFI3 127 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 PROB1E7EW31 1015 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 ENPP3O14638 875 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 DHX16O60231 1041 aaKnown RBP10.11□□□□□ -0.79
BRIP1-204ENST00000579028 GLP2RO95838 553 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 ITGB1P05556 798 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 GHRP10912 638 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 DNAJB1P25685 340 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 CCND2P30279 289 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 AVPR2P30518 371 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 NUBP1P53384 320 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 VCPP55072 806 aaKnown RBP10.11□□□□□ -0.79
BRIP1-204ENST00000579028 ASTLQ6HA08 431 aaPredicted RBP10.11□□□□□ -0.79
BRIP1-204ENST00000579028 ZNF589Q86UQ0 364 aaPredicted RBP10.11□□□□□ -0.79
BRIP1-204ENST00000579028 TICAM2Q86XR7 235 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 SPPL3Q8TCT6 385 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 LMBR1Q8WVP7 490 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 MTMR8Q96EF0 704 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 FAM227BQ96M60 508 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 PHF7Q9BWX1 381 aaPredicted RBP10.11□□□□□ -0.79
BRIP1-204ENST00000579028 BCAS3Q9H6U6 928 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 KAT14Q9H8E8 782 aa10.11□□□□□ -0.79
BRIP1-204ENST00000579028 LAMA4Q16363 1823 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 NOP56O00567 594 aaKnown RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 PPP1R11O60927 126 aaPredicted RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 CSPG5O95196 566 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 PARP1P09874 1014 aaKnown RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 ATF7P17544 494 aaPredicted RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 HOXA13P31271 388 aaPredicted RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 ICAM3P32942 547 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 ARHGAP4P98171 946 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 MGAT3Q09327 533 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 LPIN1Q14693 890 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 TAF2Q6P1X5 1199 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 METTL7BQ6UX53 244 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 IQCA1Q86XH1 822 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 CMTR2Q8IYT2 770 aaKnown RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 CRIPAKQ8N1N5 446 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 ATOH1Q92858 354 aaPredicted RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 GPR20Q99678 358 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 VAT1LQ9HCJ6 419 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 RCAN3Q9UKA8 241 aa10.1□□□□□ -0.79
BRIP1-204ENST00000579028 ZNF215Q9UL58 517 aaPredicted RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 MRPL42Q9Y6G3 142 aaKnown RBP10.1□□□□□ -0.79
BRIP1-204ENST00000579028 NRCAMQ92823 1304 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 DOCK5Q9H7D0 1870 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 ATMINO43313 823 aaPredicted RBP10.09□□□□□ -0.79
BRIP1-204ENST00000579028 NRIP1P48552 1158 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 NEDD9Q14511 834 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 GNPTABQ3T906 1256 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 FBXO47Q5MNV8 452 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 ENAHQ8N8S7 591 aaPredicted RBP10.09□□□□□ -0.79
BRIP1-204ENST00000579028 KLHL23Q8NBE8 558 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 POF1BQ8WVV4 589 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 SUSD6Q92537 303 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 ZFP91Q96JP5 570 aaPredicted RBP10.09□□□□□ -0.79
BRIP1-204ENST00000579028 INPP4AQ96PE3 977 aaPredicted RBP10.09□□□□□ -0.79
BRIP1-204ENST00000579028 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
BRIP1-204ENST00000579028 BARX2Q9UMQ3 279 aaPredicted RBP10.09□□□□□ -0.79
BRIP1-204ENST00000579028 SUPT16HQ9Y5B9 1047 aaKnown RBP10.09□□□□□ -0.79
BRIP1-204ENST00000579028 KAT6AQ92794 2004 aa10.09□□□□□ -0.79
BRIP1-204ENST00000579028 FRMPD4Q14CM0 1322 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
BRIP1-204ENST00000579028 SPATA31C2B4DYI2 1134 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms