RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 ZNF76P36508 570 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 RBM25P49756 843 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 CHMP4BP1P59074 171 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 BFSP2Q13515 415 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 ME3Q16798 604 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 DAGLBQ8NCG7 672 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 SEPT1Q8WYJ6 367 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 CTAGE1Q96RT6 745 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 ALG1Q9BT22 464 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 C22orf23Q9BZE7 217 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 AGO4Q9HCK5 861 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 PCDHA4Q9UN74 947 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 NOD1Q9Y239 953 aa15.54■□□□□ 0.08
CSNK1D-208ENST00000578501 UMODL1Q5DID0 1318 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 FAM86B1E9PN63 330 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 M0R2N6 131 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 CTDNEP1O95476 244 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 FAM86B2P0C5J1 330 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 ARP10275 920 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 HOXC8P31273 242 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 HOXD11P31277 338 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 USP11P51784 963 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 RBL2Q08999 1139 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 C16orf59Q7L2K0 433 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 CAGE1Q8TC20 777 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 PPP1R13LQ8WUF5 828 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 KIF2CQ99661 725 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 SDF4Q9BRK5 362 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 WNT8AQ9H1J5 351 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 PRDM12Q9H4Q4 367 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 JPH1Q9HDC5 661 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 IL23AQ9NPF7 189 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 ZNF215Q9UL58 517 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 TELO2Q9Y4R8 837 aa15.53■□□□□ 0.08
CSNK1D-208ENST00000578501 PRUNE2Q8WUY3 3088 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 IGLV3-22A0A075B6J6 115 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 GSTTP1A0A1W2PQM5 241 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 XBP1P17861 261 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 RFC2P35250 354 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 TCF7P36402 384 aaPredicted RBP15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 NPY5RQ15761 445 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 RAB30Q15771 203 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 TMEM240Q5SV17 173 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 PSRC1Q6PGN9 363 aaPredicted RBP15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 RPUSD2Q8IZ73 545 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 BLIDQ8IZY5 108 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 CCDC155Q8N6L0 562 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 RETREG2Q8NC44 543 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 RASGRP4Q8TDF6 673 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 WASF1Q92558 559 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.52■□□□□ 0.084e-7■□□□□ 10.6
CSNK1D-208ENST00000578501 PBX4Q9BYU1 374 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 SLC9A2Q9UBY0 812 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 MSRAQ9UJ68 235 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 LIMCH1Q9UPQ0 1083 aa15.52■□□□□ 0.08
CSNK1D-208ENST00000578501 MUC3AQ02505 3323 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 PFKMP08237 780 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 IQCF3P0C7M6 154 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 SMIM10L2AP0DMW4 78 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 SMIM10L2BP0DMW5 78 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 GNAT1P11488 350 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 IGFBP4P22692 258 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 CCL23P55773 120 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 SP4Q02446 784 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 PTK7Q13308 1070 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 ITGB3BPQ13352 177 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 AAK1Q2M2I8 961 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 RASIP1Q5U651 963 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 PLA2G4DQ86XP0 818 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 NECAB1Q8N987 351 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 AFAP1L1Q8TED9 768 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 AIFM3Q96NN9 605 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 PHF20Q9BVI0 1012 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 SMARCAD1Q9H4L7 1026 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 ERAP1Q9NZ08 941 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 PKD2L1Q9P0L9 805 aa15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 ORC3Q9UBD5 711 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-208ENST00000578501 EMSYQ7Z589 1322 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 IPO5O00410 1097 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 EDIL3O43854 480 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 LGR5O75473 907 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 ATG7O95352 703 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 PARNO95453 639 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 LARGE1O95461 756 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 CCDC85BQ15834 202 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 UTP14CQ5TAP6 766 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 ZNF365Q70YC5 407 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 SERINC5Q86VE9 423 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 TRIM50Q86XT4 487 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 NSUN7Q8NE18 718 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 HERVK_113Q902F9 699 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 DHX38Q92620 1227 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 VWCEQ96DN2 955 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 MTIF3Q9H2K0 278 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 RNPEPQ9H4A4 650 aa15.5■□□□□ 0.07
CSNK1D-208ENST00000578501 NRCAMQ92823 1304 aa15.49■□□□□ 0.07
CSNK1D-208ENST00000578501 DOCK5Q9H7D0 1870 aa15.49■□□□□ 0.07
CSNK1D-208ENST00000578501 CYP3A7-CYP3A51PA0A087WV96 503 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms