RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 KRT2P35908 639 aa26.23■■□□□ 1.79
LIMD2-204ENST00000578297 HMGN5P82970 282 aaKnown RBP26.23■■□□□ 1.79
LIMD2-204ENST00000578297 FPGSQ05932 587 aa26.23■■□□□ 1.79
LIMD2-204ENST00000578297 TRIM29Q14134 588 aa26.23■■□□□ 1.79
LIMD2-204ENST00000578297 TRIM50Q86XT4 487 aa26.23■■□□□ 1.79
LIMD2-204ENST00000578297 TDHQ8IZJ6 230 aa26.23■■□□□ 1.79
LIMD2-204ENST00000578297 CTAGE1Q96RT6 745 aa26.23■■□□□ 1.79
LIMD2-204ENST00000578297 BRMS1Q9HCU9 246 aa26.23■■□□□ 1.79
LIMD2-204ENST00000578297 NOD1Q9Y239 953 aa26.23■■□□□ 1.79
LIMD2-204ENST00000578297 CD2BP2O95400 341 aaKnown RBP26.22■■□□□ 1.79
LIMD2-204ENST00000578297 MMP1P03956 469 aa26.22■■□□□ 1.79
LIMD2-204ENST00000578297 CYP2C18P33260 490 aa26.22■■□□□ 1.79
LIMD2-204ENST00000578297 MCM2P49736 904 aa26.22■■□□□ 1.79
LIMD2-204ENST00000578297 ACTR2P61160 394 aa26.22■■□□□ 1.79
LIMD2-204ENST00000578297 Q4G0T1 1027 aa26.22■■□□□ 1.79
LIMD2-204ENST00000578297 MOXD1Q6UVY6 613 aa26.22■■□□□ 1.79
LIMD2-204ENST00000578297 TMEM199Q8N511 208 aa26.22■■□□□ 1.79
LIMD2-204ENST00000578297 UMODL1Q5DID0 1318 aa26.21■■□□□ 1.79
LIMD2-204ENST00000578297 EMSYQ7Z589 1322 aa26.21■■□□□ 1.79
LIMD2-204ENST00000578297 LGR5O75473 907 aa26.21■■□□□ 1.79
LIMD2-204ENST00000578297 ATG7O95352 703 aa26.21■■□□□ 1.79
LIMD2-204ENST00000578297 HOXC8P31273 242 aa26.21■■□□□ 1.79
LIMD2-204ENST00000578297 INF2Q27J81 1249 aa26.21■■□□□ 1.79
LIMD2-204ENST00000578297 KRT40Q6A162 431 aa26.21■■□□□ 1.79
LIMD2-204ENST00000578297 SMARCAD1Q9H4L7 1026 aa26.21■■□□□ 1.79
LIMD2-204ENST00000578297 SMIM10L2AP0DMW4 78 aa26.2■■□□□ 1.78
LIMD2-204ENST00000578297 SMIM10L2BP0DMW5 78 aa26.2■■□□□ 1.78
LIMD2-204ENST00000578297 PIK3AP1Q6ZUJ8 805 aa26.2■■□□□ 1.78
LIMD2-204ENST00000578297 TNFRSF25Q93038 417 aa26.2■■□□□ 1.78
LIMD2-204ENST00000578297 TMX3Q96JJ7 454 aa26.2■■□□□ 1.78
LIMD2-204ENST00000578297 MBOAT7Q96N66 472 aa26.2■■□□□ 1.78
LIMD2-204ENST00000578297 ERAP1Q9NZ08 941 aa26.2■■□□□ 1.78
LIMD2-204ENST00000578297 TRIOBPQ9H2D6 2365 aa26.2■■□□□ 1.78
LIMD2-204ENST00000578297 DDX39AO00148 427 aaKnown RBP26.19■■□□□ 1.78
LIMD2-204ENST00000578297 PITPNM1O00562 1244 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 MSH4O15457 936 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 TDP2O95551 362 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 CCNE2O96020 404 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 NR5A1Q13285 461 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 PPIGQ13427 754 aaKnown RBP eCLIP26.19■■□□□ 1.78
LIMD2-204ENST00000578297 HIC1Q14526 733 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 NEK8Q86SG6 692 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 GLG1Q92896 1179 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 UIMC1Q96RL1 719 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 PCYT2Q99447 389 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 WNT8AQ9H1J5 351 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 RNPEPQ9H4A4 650 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 AZI2Q9H6S1 392 aa26.19■■□□□ 1.78
LIMD2-204ENST00000578297 IGKV6D-21A0A0A0MT36 114 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 C17orf102A2RUQ5 167 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 CSF2RAP15509 400 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 FOSBP53539 338 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 EPHB4P54760 987 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 CCL23P55773 120 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 ZNF200P98182 395 aaPredicted RBP26.18■■□□□ 1.78
LIMD2-204ENST00000578297 PTK7Q13308 1070 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 BFSP2Q13515 415 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 LETM2Q2VYF4 491 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 EARS2Q5JPH6 523 aaKnown RBP26.18■■□□□ 1.78
LIMD2-204ENST00000578297 ZNF746Q6NUN9 644 aaPredicted RBP26.18■■□□□ 1.78
LIMD2-204ENST00000578297 ABHD15Q6UXT9 468 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 PLPPR4Q7Z2D5 763 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 DIS3L2Q8IYB7 885 aaKnown RBP26.18■■□□□ 1.78
LIMD2-204ENST00000578297 CCDC155Q8N6L0 562 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 CAGE1Q8TC20 777 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 RIT2Q99578 217 aa26.18■■□□□ 1.78
LIMD2-204ENST00000578297 BTBD18B2RXH4 712 aa26.17■■□□□ 1.78
LIMD2-204ENST00000578297 KRT76Q01546 638 aa26.17■■□□□ 1.78
LIMD2-204ENST00000578297 PPP4R3AQ6IN85 833 aa26.17■■□□□ 1.78
LIMD2-204ENST00000578297 FAM184AQ8NB25 1140 aa26.17■■□□□ 1.78
LIMD2-204ENST00000578297 SLC5A5Q92911 643 aa26.17■■□□□ 1.78
LIMD2-204ENST00000578297 C8orf76Q96K31 380 aa26.17■■□□□ 1.78
LIMD2-204ENST00000578297 NAP1L4Q99733 375 aaKnown RBP26.17■■□□□ 1.78
LIMD2-204ENST00000578297 LAMA3Q16787 3333 aa26.17■■□□□ 1.78
LIMD2-204ENST00000578297 GNAT1P11488 350 aa26.16■■□□□ 1.78
LIMD2-204ENST00000578297 GCFC2P16383 781 aaKnown RBP26.16■■□□□ 1.78
LIMD2-204ENST00000578297 STAT5BP51692 787 aa26.16■■□□□ 1.78
LIMD2-204ENST00000578297 RBL2Q08999 1139 aa26.16■■□□□ 1.78
LIMD2-204ENST00000578297 SHHQ15465 462 aa26.16■■□□□ 1.78
LIMD2-204ENST00000578297 SMAP1Q8IYB5 467 aaPredicted RBP26.16■■□□□ 1.78
LIMD2-204ENST00000578297 RETREG2Q8NC44 543 aa26.16■■□□□ 1.78
LIMD2-204ENST00000578297 DHX38Q92620 1227 aaKnown RBP26.16■■□□□ 1.78
LIMD2-204ENST00000578297 ATP6V0A1Q93050 837 aa26.16■■□□□ 1.78
LIMD2-204ENST00000578297 SETD4Q9NVD3 440 aa26.16■■□□□ 1.78
LIMD2-204ENST00000578297 DDX25Q9UHL0 483 aaKnown RBP26.16■■□□□ 1.78
LIMD2-204ENST00000578297 TCEAL9Q9UHQ7 104 aa26.16■■□□□ 1.78
LIMD2-204ENST00000578297 NRCAMQ92823 1304 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 TRIP12Q14669 1992 aaPredicted RBP26.15■■□□□ 1.78
LIMD2-204ENST00000578297 MARK3P27448 753 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 SLC26A2P50443 739 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 ADAM17P78536 824 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 SAFBQ15424 915 aaKnown RBP eCLIP26.15■■□□□ 1.78
LIMD2-204ENST00000578297 LRIT3Q3SXY7 679 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 C9orf50Q5SZB4 431 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 MIS18BP1Q6P0N0 1132 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 SERINC5Q86VE9 423 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 FBXO18Q8NFZ0 1043 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 ETNPPLQ8TBG4 499 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 AFAP1L1Q8TED9 768 aa26.15■■□□□ 1.78
LIMD2-204ENST00000578297 IL23AQ9NPF7 189 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms