RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 BAG4O95429 457 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 TDP2O95551 362 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 ITGB8P26012 769 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 PTGDRQ13258 359 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 PDIA5Q14554 519 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 ZNF174Q15697 407 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 FOXD4L5Q5VV16 416 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 B3GNT9Q6UX72 402 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 ARMCX2Q7L311 632 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 SH3RF1Q7Z6J0 888 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 NLRX1Q86UT6 975 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 CYP2W1Q8TAV3 490 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 ETNPPLQ8TBG4 499 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 FOXD4L4Q8WXT5 416 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 HAS1Q92839 578 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 ABHD16BQ9H3Z7 469 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 VTA1Q9NP79 307 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 KCNH7Q9NS40 1196 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 TFIP11Q9UBB9 837 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 ZDBF2Q9HCK1 2354 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 MYH15Q9Y2K3 1946 aa12.6□□□□□ -0.39
CDK5RAP3-204ENST00000577664 CFAP54Q96N23 3096 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 DHX15O43143 795 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 FIBPO43427 364 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 SLC37A4O43826 429 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 TLL1O43897 1013 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 NEMFO60524 1076 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 ZNF76P36508 570 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 PDE4DQ08499 809 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 SEMA3FQ13275 785 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 GNPTABQ3T906 1256 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 TAPT1Q6NXT6 567 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 CCDC62Q6P9F0 684 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 SLFN12Q8IYM2 578 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 KCNG4Q8TDN1 519 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 SLC5A5Q92911 643 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 FERMT2Q96AC1 680 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 RIT2Q99578 217 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 PBX4Q9BYU1 374 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 WDR11Q9BZH6 1224 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 TMEM60Q9H2L4 133 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 FLRT1Q9NZU1 646 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 SRPRBQ9Y5M8 271 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 NFASCO94856 1347 aa12.59□□□□□ -0.39
CDK5RAP3-204ENST00000577664 TCHHQ07283 1943 aa12.58□□□□□ -0.39
CDK5RAP3-204ENST00000577664 SPTLC2O15270 562 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 MSH4O15457 936 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 PSMD10O75832 226 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 ARP10275 920 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 MYCLP12524 364 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 MCM7P33993 719 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 MTMR1Q13613 665 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 NBR1Q14596 966 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 CCL14Q16627 93 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 PRR16Q569H4 304 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 IQSEC1Q6DN90 963 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 PLA2G4DQ86XP0 818 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 GIMAP8Q8ND71 665 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 LEO1Q8WVC0 666 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 FBXL18Q96ME1 805 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 AGO4Q9HCK5 861 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 TBC1D22BQ9NU19 505 aa12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 DDX20Q9UHI6 824 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-204ENST00000577664 LRRC37A2A6NM11 1700 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 KIAA1217Q5T5P2 1943 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 IPO5O00410 1097 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 OR52Z1P0C646 297 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 ZNF865P0CJ78 1059 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 KCNA2P16389 499 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 NKX3-2P78367 333 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 ACVR2BQ13705 512 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 CALCRLQ16602 461 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 CSPP1Q1MSJ5 1256 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 AXDND1Q5T1B0 1012 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 RASIP1Q5U651 963 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 ADALQ6DHV7 355 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 IGSF22Q8N9C0 903 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 SCFD2Q8WU76 684 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 HERVK_113Q902F9 699 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 FTOQ9C0B1 505 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 DDX41Q9UJV9 622 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 FBXO2Q9UK22 296 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 Q9Y3F1 56 aa12.57□□□□□ -0.4
CDK5RAP3-204ENST00000577664 KIAA0355O15063 1070 aa12.56□□□□□ -0.4
CDK5RAP3-204ENST00000577664 NKRFO15226 690 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDK5RAP3-204ENST00000577664 SLC26A4O43511 780 aa12.56□□□□□ -0.4
CDK5RAP3-204ENST00000577664 ATP9AO75110 1047 aa12.56□□□□□ -0.4
CDK5RAP3-204ENST00000577664 ATP2B1P20020 1258 aa12.56□□□□□ -0.4
CDK5RAP3-204ENST00000577664 IGFBP4P22692 258 aa12.56□□□□□ -0.4
CDK5RAP3-204ENST00000577664 PBX2P40425 430 aa12.56□□□□□ -0.4
CDK5RAP3-204ENST00000577664 SPIRE1Q08AE8 756 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms