RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 TRIM11Q96F44 468 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 TMCC1O94876 653 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 FAM173BQ6P4H8 233 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 RUBCNLQ9H714 662 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 GGCXP38435 758 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 TTC38Q5R3I4 469 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 SFR1Q86XK3 245 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 ANKRD13CQ8N6S4 541 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 DLGAP2Q9P1A6 1054 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 SEMA3DO95025 777 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 PMLP29590 882 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 OR8H2Q8N162 312 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 NEK9Q8TD19 979 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 TGS1Q96RS0 853 aaKnown RBP11.31□□□□□ -0.6
USP6-206ENST00000575709 NFU1Q9UMS0 254 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 SMCO2A6NFE2 343 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 GOLGA8TH3BQL2 631 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 STRNO43815 780 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 GALNT4Q8N4A0 578 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 NSD3Q9BZ95 1437 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 ZBTB24O43167 697 aaPredicted RBP11.31□□□□□ -0.6
USP6-206ENST00000575709 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
USP6-206ENST00000575709 COPB2P35606 906 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 OSBPL9Q96SU4 736 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 ZBTB3Q9H5J0 574 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 MCM9Q9NXL9 1143 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 NME9Q86XW9 330 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 MDM1Q8TC05 714 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 PCDHGA3Q9Y5H0 932 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 LSM1O15116 133 aaKnown RBP11.31□□□□□ -0.6
USP6-206ENST00000575709 GRM1Q13255 1194 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 ANO4Q32M45 955 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 DARS2Q6PI48 645 aaKnown RBP11.31□□□□□ -0.6
USP6-206ENST00000575709 CLEC4FQ8N1N0 589 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 TEKT4Q8WW24 435 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 LRRC39Q96DD0 335 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 HIC2Q96JB3 615 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 PPP1R36Q96LQ0 422 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 CLEC4MQ9H2X3 399 aaPredicted RBP11.31□□□□□ -0.6
USP6-206ENST00000575709 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
USP6-206ENST00000575709 CAND2O75155 1236 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 PDE9AO76083 593 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 ATP6V1B1P15313 513 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 RPS6KB1P23443 525 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 TMOD1P28289 359 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 KRR1Q13601 381 aaKnown RBP11.3□□□□□ -0.6
USP6-206ENST00000575709 DAB2IPQ5VWQ8 1189 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 FAM178BQ8IXR5 827 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 PYROXD1Q8WU10 500 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 TTC25Q96NG3 672 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
USP6-206ENST00000575709 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 TMEM63CQ9P1W3 806 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 RASA4BC9J798 803 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 RASA4O43374 803 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 HAUS5O94927 633 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 GUCA1CO95843 209 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 CTCFP49711 727 aaPredicted RBP11.3□□□□□ -0.6
USP6-206ENST00000575709 DNM2P50570 870 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 C10orf76Q5T2E6 689 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 JDP2Q8WYK2 163 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 ARL8AQ96BM9 186 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 TAC1P20366 129 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 IL12RB1P42701 662 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 KCTD17Q8N5Z5 321 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 CCNYQ8ND76 341 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 AP1M1Q9BXS5 423 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 C16orf96A6NNT2 1141 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 ASNA1O43681 348 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 DEXIO95424 95 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 EXOSC4Q9NPD3 245 aaKnown RBP11.3□□□□□ -0.6
USP6-206ENST00000575709 PGRMC1O00264 195 aaKnown RBP11.3□□□□□ -0.6
USP6-206ENST00000575709 SNUPNO95149 360 aaKnown RBP11.3□□□□□ -0.6
USP6-206ENST00000575709 ARIH2O95376 493 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 C16orf72Q14CZ0 275 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 SOX6P35712 828 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 KRT33BQ14525 404 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 NCOA5Q9HCD5 579 aaKnown RBP11.3□□□□□ -0.6
USP6-206ENST00000575709 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
USP6-206ENST00000575709 COPEO14579 308 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
USP6-206ENST00000575709 PTK2BQ14289 1009 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 CCDC81Q6ZN84 652 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 USP33Q8TEY7 942 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 DBF4Q9UBU7 674 aaPredicted RBP11.29□□□□□ -0.6
USP6-206ENST00000575709 DR1Q01658 176 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 KLHL24Q6TFL4 600 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 RRM2BQ7LG56 351 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 NLRP14Q86W24 1093 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 DMAP1Q9NPF5 467 aaPredicted RBP11.29□□□□□ -0.6
USP6-206ENST00000575709 HPS4Q9NQG7 708 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 KDRP35968 1356 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 CFAP69A5D8W1 941 aa11.29□□□□□ -0.6
USP6-206ENST00000575709 PGM1P36871 562 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms