RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
USP6-206ENST00000575709 ERICH6Q7L0X2 663 aa17.22■□□□□ 0.35
USP6-206ENST00000575709 MYT1Q01538 1121 aa17.12■□□□□ 0.33
USP6-206ENST00000575709 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
USP6-206ENST00000575709 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
USP6-206ENST00000575709 CENPBP07199 599 aaPredicted RBP16.5■□□□□ 0.23
USP6-206ENST00000575709 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
USP6-206ENST00000575709 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
USP6-206ENST00000575709 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
USP6-206ENST00000575709 NEFLP07196 543 aa16.2■□□□□ 0.18
USP6-206ENST00000575709 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
USP6-206ENST00000575709 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
USP6-206ENST00000575709 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
USP6-206ENST00000575709 APLP2Q06481 763 aa15.97■□□□□ 0.15
USP6-206ENST00000575709 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
USP6-206ENST00000575709 ZEB1P37275 1124 aaPredicted RBP15.8■□□□□ 0.12
USP6-206ENST00000575709 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
USP6-206ENST00000575709 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
USP6-206ENST00000575709 GLIPR1L2Q4G1C9 344 aa15.44■□□□□ 0.06
USP6-206ENST00000575709 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
USP6-206ENST00000575709 SHROOM4Q9ULL8 1493 aa15.44■□□□□ 0.06
USP6-206ENST00000575709 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
USP6-206ENST00000575709 CLSPNQ9HAW4 1339 aa15.39■□□□□ 0.05
USP6-206ENST00000575709 ATP1B4Q9UN42 357 aaPredicted RBP15.27■□□□□ 0.03
USP6-206ENST00000575709 POLR3GLQ9BT43 218 aa15.24■□□□□ 0.03
USP6-206ENST00000575709 CNGB1Q14028 1251 aaPredicted RBP15.2■□□□□ 0.02
USP6-206ENST00000575709 HRCP23327 699 aa15.14■□□□□ 0.01
USP6-206ENST00000575709 BCANQ96GW7 911 aa15.11■□□□□ 0.01
USP6-206ENST00000575709 CDK11AQ9UQ88 783 aaPredicted RBP15.06■□□□□ 0
USP6-206ENST00000575709 GTF3C3Q9Y5Q9 886 aa15.02□□□□□ -0.01
USP6-206ENST00000575709 PPARGC1BQ86YN6 1023 aaKnown RBP15.01□□□□□ -0.01
USP6-206ENST00000575709 ANP32BQ92688 251 aaKnown RBP14.98□□□□□ -0.01
USP6-206ENST00000575709 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
USP6-206ENST00000575709 ANP32AP39687 249 aaKnown RBP14.9□□□□□ -0.02
USP6-206ENST00000575709 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
USP6-206ENST00000575709 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
USP6-206ENST00000575709 UBTFP17480 764 aaKnown RBP14.86□□□□□ -0.03
USP6-206ENST00000575709 TRIM26Q12899 539 aaPredicted RBP14.86□□□□□ -0.03
USP6-206ENST00000575709 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
USP6-206ENST00000575709 ZBTB47Q9UFB7 747 aaPredicted RBP14.85□□□□□ -0.03
USP6-206ENST00000575709 NBR1Q14596 966 aa14.79□□□□□ -0.04
USP6-206ENST00000575709 ARXQ96QS3 562 aa14.78□□□□□ -0.04
USP6-206ENST00000575709 TNNT2P45379 298 aaPredicted RBP14.78□□□□□ -0.04
USP6-206ENST00000575709 ITGAEP38570 1179 aa14.77□□□□□ -0.04
USP6-206ENST00000575709 TRIM41Q8WV44 630 aa14.77□□□□□ -0.05
USP6-206ENST00000575709 AMER1Q5JTC6 1135 aaPredicted RBP14.72□□□□□ -0.05
USP6-206ENST00000575709 CDK11BP21127 795 aaKnown RBP14.69□□□□□ -0.06
USP6-206ENST00000575709 MYT1LQ9UL68 1186 aa14.69□□□□□ -0.06
USP6-206ENST00000575709 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
USP6-206ENST00000575709 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
USP6-206ENST00000575709 CANXP27824 592 aaKnown RBP14.66□□□□□ -0.06
USP6-206ENST00000575709 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
USP6-206ENST00000575709 SLC24A1O60721 1099 aa14.57□□□□□ -0.08
USP6-206ENST00000575709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.08
USP6-206ENST00000575709 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
USP6-206ENST00000575709 ANP32CO43423 234 aa14.5□□□□□ -0.09
USP6-206ENST00000575709 TRIM44Q96DX7 344 aaPredicted RBP14.48□□□□□ -0.09
USP6-206ENST00000575709 RTN4Q9NQC3 1192 aaKnown RBP14.47□□□□□ -0.09
USP6-206ENST00000575709 UPF2Q9HAU5 1272 aaKnown RBP14.46□□□□□ -0.09
USP6-206ENST00000575709 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
USP6-206ENST00000575709 FKBP8Q14318 412 aa14.4□□□□□ -0.1
USP6-206ENST00000575709 DNTTIP2Q5QJE6 756 aaKnown RBP14.38□□□□□ -0.11
USP6-206ENST00000575709 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
USP6-206ENST00000575709 ZNF326Q5BKZ1 582 aaKnown RBP14.32□□□□□ -0.12
USP6-206ENST00000575709 PTMAP06454 111 aaKnown RBP14.27□□□□□ -0.12
USP6-206ENST00000575709 NCLP19338 710 aaKnown RBP14.26□□□□□ -0.13
USP6-206ENST00000575709 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
USP6-206ENST00000575709 ERICH6BQ5W0A0 696 aa14.25□□□□□ -0.13
USP6-206ENST00000575709 NEFMP07197 916 aa14.24□□□□□ -0.13
USP6-206ENST00000575709 ANP32EQ9BTT0 268 aa14.22□□□□□ -0.13
USP6-206ENST00000575709 ARID4BQ4LE39 1312 aaPredicted RBP14.19□□□□□ -0.14
USP6-206ENST00000575709 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
USP6-206ENST00000575709 TRIM52Q96A61 297 aa14.18□□□□□ -0.14
USP6-206ENST00000575709 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
USP6-206ENST00000575709 CCDC136Q96JN2 1154 aa14.15□□□□□ -0.14
USP6-206ENST00000575709 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
USP6-206ENST00000575709 TNNT3P45378 269 aaPredicted RBP14.15□□□□□ -0.14
USP6-206ENST00000575709 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
USP6-206ENST00000575709 CALRP27797 417 aaKnown RBP14.11□□□□□ -0.15
USP6-206ENST00000575709 ARID3AQ99856 593 aa14.1□□□□□ -0.15
USP6-206ENST00000575709 DDRGK1Q96HY6 314 aa14.1□□□□□ -0.15
USP6-206ENST00000575709 GOLGA6L22H0YM25 854 aa14.09□□□□□ -0.15
USP6-206ENST00000575709 BECN1Q14457 450 aa14.09□□□□□ -0.15
USP6-206ENST00000575709 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
USP6-206ENST00000575709 ZRSR1Q15695 479 aaKnown RBP14.06□□□□□ -0.16
USP6-206ENST00000575709 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
USP6-206ENST00000575709 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
USP6-206ENST00000575709 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
USP6-206ENST00000575709 SALL2Q9Y467 1007 aaPredicted RBP14.03□□□□□ -0.16
USP6-206ENST00000575709 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.03□□□□□ -0.16
USP6-206ENST00000575709 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.17
USP6-206ENST00000575709 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
USP6-206ENST00000575709 FAM9BQ8IZU0 186 aa13.99□□□□□ -0.17
USP6-206ENST00000575709 LAS1LQ9Y4W2 734 aaKnown RBP13.98□□□□□ -0.17
USP6-206ENST00000575709 MSNP26038 577 aaKnown RBP13.97□□□□□ -0.17
USP6-206ENST00000575709 GOLGA6L6A8MZA4 724 aa13.96□□□□□ -0.18
USP6-206ENST00000575709 ZBTB7CA1YPR0 619 aa13.94□□□□□ -0.18
USP6-206ENST00000575709 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
USP6-206ENST00000575709 DEKP35659 375 aaKnown RBP13.94□□□□□ -0.18
USP6-206ENST00000575709 PPM1GO15355 546 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms