RNA–Protein interactions for RNA: ENST00000575637.1

CHRNE-203, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 3

Gene CHRNE, Length 557 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-203ENST00000575637 CCL23P55773 120 aa20.02■□□□□ 0.8
CHRNE-203ENST00000575637 ZNF200P98182 395 aaPredicted RBP20.02■□□□□ 0.8
CHRNE-203ENST00000575637 SETQ01105 290 aaPredicted RBP20.02■□□□□ 0.8
CHRNE-203ENST00000575637 PPIGQ13427 754 aaKnown RBP eCLIP20.02■□□□□ 0.8
CHRNE-203ENST00000575637 PRR16Q569H4 304 aa20.02■□□□□ 0.8
CHRNE-203ENST00000575637 LENG9Q96B70 501 aa20.02■□□□□ 0.8
CHRNE-203ENST00000575637 ZSCAN31Q96LW9 406 aaPredicted RBP20.02■□□□□ 0.8
CHRNE-203ENST00000575637 ZNF215Q9UL58 517 aaPredicted RBP20.02■□□□□ 0.8
CHRNE-203ENST00000575637 IPO5O00410 1097 aaKnown RBP20.01■□□□□ 0.79
CHRNE-203ENST00000575637 SOX1O00570 391 aaPredicted RBP20.01■□□□□ 0.79
CHRNE-203ENST00000575637 DHX15O43143 795 aaKnown RBP20.01■□□□□ 0.79
CHRNE-203ENST00000575637 SMIM10L2AP0DMW4 78 aa20.01■□□□□ 0.79
CHRNE-203ENST00000575637 SMIM10L2BP0DMW5 78 aa20.01■□□□□ 0.79
CHRNE-203ENST00000575637 ACTR2P61160 394 aa20.01■□□□□ 0.79
CHRNE-203ENST00000575637 C16orf59Q7L2K0 433 aa20.01■□□□□ 0.79
CHRNE-203ENST00000575637 KRT25Q7Z3Z0 450 aa20.01■□□□□ 0.79
CHRNE-203ENST00000575637 OXER1Q8TDS5 423 aa20.01■□□□□ 0.79
CHRNE-203ENST00000575637 PCYT2Q99447 389 aa20.01■□□□□ 0.79
CHRNE-203ENST00000575637 ZNF577Q9BSK1 485 aa20.01■□□□□ 0.79
CHRNE-203ENST00000575637 SH2B1Q9NRF2 756 aaPredicted RBP20.01■□□□□ 0.79
CHRNE-203ENST00000575637 DDX39AO00148 427 aaKnown RBP20■□□□□ 0.79
CHRNE-203ENST00000575637 CCNE2O96020 404 aa20■□□□□ 0.79
CHRNE-203ENST00000575637 HOXC8P31273 242 aa20■□□□□ 0.79
CHRNE-203ENST00000575637 NONOQ15233 471 aaKnown RBP eCLIP20■□□□□ 0.79
CHRNE-203ENST00000575637 LRIT3Q3SXY7 679 aa20■□□□□ 0.79
CHRNE-203ENST00000575637 DHX38Q92620 1227 aaKnown RBP20■□□□□ 0.79
CHRNE-203ENST00000575637 SCLYQ96I15 445 aa20■□□□□ 0.79
CHRNE-203ENST00000575637 BACH2Q9BYV9 841 aa20■□□□□ 0.79
CHRNE-203ENST00000575637 RNPEPQ9H4A4 650 aa20■□□□□ 0.79
CHRNE-203ENST00000575637 C17orf102A2RUQ5 167 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 PITPNM1O00562 1244 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 LGR5O75473 907 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 ACRP10323 421 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 FOSBP53539 338 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 BFSP2Q13515 415 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 INF2Q27J81 1249 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 GLG1Q92896 1179 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.99■□□□□ 0.79
CHRNE-203ENST00000575637 LLPHQ9BRT6 129 aaKnown RBP19.99■□□□□ 0.79
CHRNE-203ENST00000575637 SMARCAD1Q9H4L7 1026 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 IL23AQ9NPF7 189 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 EMSYQ7Z589 1322 aa19.99■□□□□ 0.79
CHRNE-203ENST00000575637 CYP3A7-CYP3A51PA0A087WV96 503 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 CCDC194A0A1B0GVG4 234 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 ST18O60284 1047 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 ATG7O95352 703 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 TDP2O95551 362 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 CYP3A7P24462 503 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 MARK3P27448 753 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 NR5A1Q13285 461 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 PTK7Q13308 1070 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 RETREG2Q8NC44 543 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 CAGE1Q8TC20 777 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 WNT8BQ93098 351 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 VWCEQ96DN2 955 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 TBC1D22BQ9NU19 505 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 SETD4Q9NVD3 440 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 ERAP1Q9NZ08 941 aa19.98■□□□□ 0.79
CHRNE-203ENST00000575637 MSH4O15457 936 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 CD2BP2O95400 341 aaKnown RBP19.97■□□□□ 0.79
CHRNE-203ENST00000575637 KRT2P35908 639 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 TRIM71Q2Q1W2 868 aaKnown RBP19.97■□□□□ 0.79
CHRNE-203ENST00000575637 Q4G0T1 1027 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 EARS2Q5JPH6 523 aaKnown RBP19.97■□□□□ 0.79
CHRNE-203ENST00000575637 TMEM240Q5SV17 173 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 ABHD15Q6UXT9 468 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 PIK3AP1Q6ZUJ8 805 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 SERINC5Q86VE9 423 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 CCDC155Q8N6L0 562 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 ATP6V0A1Q93050 837 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 LRCH3Q96II8 777 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 RNPC3Q96LT9 517 aaKnown RBP19.97■□□□□ 0.79
CHRNE-203ENST00000575637 MBOAT7Q96N66 472 aa19.97■□□□□ 0.79
CHRNE-203ENST00000575637 TREHO43280 583 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 MMP1P03956 469 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 IQCF3P0C7M6 154 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 RBL2Q08999 1139 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 TRIM29Q14134 588 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 LETM2Q2VYF4 491 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 KRT40Q6A162 431 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 MOXD1Q6UVY6 613 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 ZNF365Q70YC5 407 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 AFAP1L1Q8TED9 768 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 LMBR1Q8WVP7 490 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 SLC5A5Q92911 643 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 TNFRSF25Q93038 417 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 AZI2Q9H6S1 392 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 BRMS1Q9HCU9 246 aa19.96■□□□□ 0.79
CHRNE-203ENST00000575637 IGKV6D-21A0A0A0MT36 114 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 FAM205CA6NFA0 338 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 GNAT1P11488 350 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 CKBP12277 381 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 STAT5BP51692 787 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 ADAM17P78536 824 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 PPFIA1Q13136 1202 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 ZNF746Q6NUN9 644 aaPredicted RBP19.95■□□□□ 0.78
CHRNE-203ENST00000575637 PSRC1Q6PGN9 363 aaPredicted RBP19.95■□□□□ 0.78
CHRNE-203ENST00000575637 PLPPR4Q7Z2D5 763 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 NEK8Q86SG6 692 aa19.95■□□□□ 0.78
CHRNE-203ENST00000575637 IL27Q8NEV9 243 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms