RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 C6orf50Q9HD87 102 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 RTEL1Q9NZ71 1219 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 MSRAQ9UJ68 235 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 SLC4A7Q9Y6M7 1214 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 NOP56O00567 594 aaKnown RBP13.49□□□□□ -0.25
NDE1-206ENST00000572967 MEIS2O14770 477 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 ATP2A2P16615 1042 aaKnown RBP13.49□□□□□ -0.25
NDE1-206ENST00000572967 ZNF200P98182 395 aaPredicted RBP13.49□□□□□ -0.25
NDE1-206ENST00000572967 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 GNL2Q13823 731 aaKnown RBP13.49□□□□□ -0.25
NDE1-206ENST00000572967 GNPTABQ3T906 1256 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 PPP2R2DQ66LE6 453 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 KCNV1Q6PIU1 500 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 LRRC8DQ7L1W4 858 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 TRIM50Q86XT4 487 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 USP38Q8NB14 1042 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 CAGE1Q8TC20 777 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 WNT8BQ93098 351 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 INPP4AQ96PE3 977 aaPredicted RBP13.49□□□□□ -0.25
NDE1-206ENST00000572967 FTOQ9C0B1 505 aaKnown RBP eCLIP13.49□□□□□ -0.25
NDE1-206ENST00000572967 PRDM12Q9H4Q4 367 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 BCAS3Q9H6U6 928 aa13.49□□□□□ -0.25
NDE1-206ENST00000572967 LAMA2P24043 3122 aaKnown RBP13.49□□□□□ -0.25
NDE1-206ENST00000572967 HAS3O00219 553 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 DLL1O00548 723 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 FIBPO43427 364 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 LGALS2P05162 132 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 ACTN1P12814 892 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
NDE1-206ENST00000572967 RFC2P35250 354 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 ADCY7P51828 1080 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 NLRP5P59047 1200 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 WWC2Q6AWC2 1192 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 AFAP1L1Q8TED9 768 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 GAS2L1Q99501 681 aaPredicted RBP13.48□□□□□ -0.25
NDE1-206ENST00000572967 EHMT1Q9H9B1 1298 aa13.48□□□□□ -0.25
NDE1-206ENST00000572967 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
NDE1-206ENST00000572967 STXBP3O00186 592 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 PIK3CDO00329 1044 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 STX6O43752 255 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 FDPSP14324 419 aaKnown RBP13.47□□□□□ -0.25
NDE1-206ENST00000572967 SELPP16109 830 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 HIC1Q14526 733 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 PKN1Q16512 942 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 CYFIP1Q7L576 1253 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 FBXO18Q8NFZ0 1043 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 SLC9A7Q96T83 725 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 C16orf70Q9BSU1 422 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 SLC28A3Q9HAS3 691 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 PKD2L1Q9P0L9 805 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 VPS54Q9P1Q0 977 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 TELO2Q9Y4R8 837 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 ATP6V1DQ9Y5K8 247 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 CDH23Q9H251 3354 aa13.47□□□□□ -0.25
NDE1-206ENST00000572967 KAT6AQ92794 2004 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 PPFIA3O75145 1194 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 STAM2O75886 525 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 CA3P07451 260 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 TGFB3P10600 412 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 CKBP12277 381 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 SYT1P21579 422 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 ICAM3P32942 547 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 KRT2P35908 639 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 KRT40Q6A162 431 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 METTL7BQ6UX53 244 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 REXO1Q8N1G1 1221 aaKnown RBP13.46□□□□□ -0.25
NDE1-206ENST00000572967 DAGLBQ8NCG7 672 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 PPM1EQ8WY54 764 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 PGBD1Q96JS3 809 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 ZMYND12Q9H0C1 365 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 PSTPIP2Q9H939 334 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 CHMP5Q9NZZ3 219 aa13.46□□□□□ -0.25
NDE1-206ENST00000572967 C17orf102A2RUQ5 167 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 SMCO2A6NFE2 343 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 H3BRB1 525 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 NBNO60934 754 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 FOSP01100 380 aaPredicted RBP13.45□□□□□ -0.26
NDE1-206ENST00000572967 MMP1P03956 469 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 SMIM10L2AP0DMW4 78 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 SMIM10L2BP0DMW5 78 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 KCNJ6P48051 423 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 RBL2Q08999 1139 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 PTK7Q13308 1070 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 NEDD9Q14511 834 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 TCTN1Q2MV58 587 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 TRIM71Q2Q1W2 868 aaKnown RBP13.45□□□□□ -0.26
NDE1-206ENST00000572967 ZNF618Q5T7W0 954 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 UTP14CQ5TAP6 766 aaKnown RBP13.45□□□□□ -0.26
NDE1-206ENST00000572967 TYW1BQ6NUM6 668 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 BRAPQ7Z569 592 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 TMCO2Q7Z6W1 182 aaPredicted RBP13.45□□□□□ -0.26
NDE1-206ENST00000572967 NLRX1Q86UT6 975 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 GPR20Q99678 358 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 PHF20Q9BVI0 1012 aa13.45□□□□□ -0.26
NDE1-206ENST00000572967 FOXP1Q9H334 677 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms