RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MROH7Q68CQ1 1323 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 PNMA6FA0A0J9YX94 578 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 A0A0U1RQG5 324 aaPredicted RBP8.61□□□□□ -1.03
NUP88-205ENST00000572809 CCDC69A6NI79 296 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 KIAA0355O15063 1070 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 NKRFO15226 690 aaKnown RBP eCLIP8.61□□□□□ -1.03
NUP88-205ENST00000572809 CYTH3O43739 400 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 PPP1R11O60927 126 aaPredicted RBP8.61□□□□□ -1.03
NUP88-205ENST00000572809 CDC45O75419 566 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 NEFLP07196 543 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 CCNYL3P0C7X3 344 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 RAG1P15918 1043 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 PTGS1P23219 599 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 KCNH2Q12809 1159 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 STXBP2Q15833 593 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 SLC35G1Q2M3R5 365 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 LRIT3Q3SXY7 679 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 ARHGEF16Q5VV41 709 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 CXCL17Q6UXB2 119 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 NFXL1Q6ZNB6 911 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 HOMER1Q86YM7 354 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 ZNF654Q8IZM8 581 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 SAMD3Q8N6K7 520 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 CTCFLQ8NI51 663 aaPredicted RBP8.61□□□□□ -1.03
NUP88-205ENST00000572809 SCFD2Q8WU76 684 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 GPKOWQ92917 476 aaPredicted RBP eCLIP8.61□□□□□ -1.03
NUP88-205ENST00000572809 IWS1Q96ST2 819 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 RMDN3Q96TC7 470 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 COL20A1Q9P218 1284 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 TFIP11Q9UBB9 837 aaKnown RBP8.61□□□□□ -1.03
NUP88-205ENST00000572809 TRIOBPQ9H2D6 2365 aa8.61□□□□□ -1.03
NUP88-205ENST00000572809 SOX1O00570 391 aaPredicted RBP8.6□□□□□ -1.03
NUP88-205ENST00000572809 SH2B2O14492 632 aaPredicted RBP8.6□□□□□ -1.03
NUP88-205ENST00000572809 OPLAHO14841 1288 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 TLR3O15455 904 aaKnown RBP8.6□□□□□ -1.03
NUP88-205ENST00000572809 DDAH1O94760 285 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 VSIG8P0DPA2 414 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 TXNP10599 105 aaKnown RBP8.6□□□□□ -1.03
NUP88-205ENST00000572809 ITGB8P26012 769 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 SMARCA1P28370 1054 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 KIF5BP33176 963 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 LIFRP42702 1097 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 GNAQP50148 359 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 HSD17B4P51659 736 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
NUP88-205ENST00000572809 ITGA7Q13683 1181 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 TTLL4Q14679 1199 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 PPP2R5BQ15173 497 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 BRDTQ58F21 947 aaPredicted RBP8.6□□□□□ -1.03
NUP88-205ENST00000572809 SEPT14Q6ZU15 432 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 RETREG2Q8NC44 543 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 OR6J1Q8NGC5 347 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 PIBF1Q8WXW3 757 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 NEK1Q96PY6 1258 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 LZTS2Q9BRK4 669 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 MYL10Q9BUA6 226 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 SEZ6LQ9BYH1 1024 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 GPSM3Q9Y4H4 160 aa8.6□□□□□ -1.03
NUP88-205ENST00000572809 LCTP09848 1927 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 GCOM1H8Y6P7 765 aaPredicted RBP8.59□□□□□ -1.03
NUP88-205ENST00000572809 EIF3JO75822 258 aaKnown RBP8.59□□□□□ -1.03
NUP88-205ENST00000572809 TIMP1P01033 207 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 NR3C2P08235 984 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 MYL3P08590 195 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 FBXO45P0C2W1 286 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 POLR2MP0CAP2 368 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 CALM1P0DP23 149 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 CALM2P0DP24 149 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 CALM3P0DP25 149 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 EIF2AK2P19525 551 aaKnown RBP8.59□□□□□ -1.03
NUP88-205ENST00000572809 HOXA13P31271 388 aaPredicted RBP8.59□□□□□ -1.03
NUP88-205ENST00000572809 GSK3AP49840 483 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 CPT1AP50416 773 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 PSMC6P62333 389 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 GHRHRQ02643 423 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 PTK2Q05397 1052 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 COL9A3Q14050 684 aaPredicted RBP8.59□□□□□ -1.03
NUP88-205ENST00000572809 SHHQ15465 462 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 TSGA10IPQ3SY00 556 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 PDXDC2PQ6P474 469 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 CCDC62Q6P9F0 684 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 SLC43A3Q8NBI5 491 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 COPS5Q92905 334 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 RRP36Q96EU6 259 aaKnown RBP8.59□□□□□ -1.03
NUP88-205ENST00000572809 LRRC2Q9BYS8 371 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 PXMP2Q9NR77 195 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 MAP10Q9P2G4 905 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 SLC12A7Q9Y666 1083 aa8.59□□□□□ -1.03
NUP88-205ENST00000572809 GRIN2DO15399 1336 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 KPNA6O60684 536 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 ARIH2O95376 493 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 GH1P01241 217 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 CD4P01730 458 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 MYCLP12524 364 aaPredicted RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 RXRAP19793 462 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 PURAQ00577 322 aaKnown RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 EXOSC10Q01780 885 aaKnown RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 FPGSQ05932 587 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 NNTQ13423 1086 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms