RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 DDX39AO00148 427 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 TREHO43280 583 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 EIF5BO60841 1220 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 CCNE2O96020 404 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 HOXC8P31273 242 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 CIITAP33076 1130 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 CPLX2Q6PUV4 134 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 Q7L0L9 218 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 DEFB128Q7Z7B8 93 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 BLIDQ8IZY5 108 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 GIMAP8Q8ND71 665 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 OXER1Q8TDS5 423 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 GJA10Q969M2 543 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 LENG9Q96B70 501 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 RNPC3Q96LT9 517 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 PHF20Q9BVI0 1012 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 OSBPL7Q9BZF2 842 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 SETD4Q9NVD3 440 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 SLC9A2Q9UBY0 812 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 WDR81Q562E7 1941 aa11.66□□□□□ -0.54
GTF3C1-213ENST00000571886 NFASCO94856 1347 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 STK36Q9NRP7 1315 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 GRXCR1A8MXD5 290 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 LGR5O75473 907 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 ATG7O95352 703 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 CKBP12277 381 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 MARK3P27448 753 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 RBM25P49756 843 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 FOSBP53539 338 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 ACTR2P61160 394 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 ADAM17P78536 824 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 TCTN1Q2MV58 587 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 PRR16Q569H4 304 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 EARS2Q5JPH6 523 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 RASIP1Q5U651 963 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 TRAF7Q6Q0C0 670 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 NIPA1Q7RTP0 329 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 OTOP2Q7RTS6 562 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 DAGLBQ8NCG7 672 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 BICD2Q8TD16 824 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 TBCKQ8TEA7 893 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 ZBTB10Q96DT7 871 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 JPH1Q9HDC5 661 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 TANC1Q9C0D5 1861 aa11.65□□□□□ -0.54
GTF3C1-213ENST00000571886 LAMA2P24043 3122 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 C17orf102A2RUQ5 167 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 CDKL5O76039 1030 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 TDP2O95551 362 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 FGBP02675 491 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 PTK7Q13308 1070 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 BFSP2Q13515 415 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 ZNF618Q5T7W0 954 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 RETREG2Q8NC44 543 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 HERVK_113Q902F9 699 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 ATP6V0A1Q93050 837 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 SDF4Q9BRK5 362 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 LIMCH1Q9UPQ0 1083 aa11.64□□□□□ -0.55
GTF3C1-213ENST00000571886 GBF1Q92538 1859 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 IGKV6D-21A0A0A0MT36 114 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 IPO5O00410 1097 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 PITPNM1O00562 1244 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 MSH4O15457 936 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 NBNO60934 754 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 ATP4AP20648 1035 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 PBX2P40425 430 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 USP11P51784 963 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 RBL2Q08999 1139 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 MBTPS1Q14703 1052 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 INF2Q27J81 1249 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 MARCH8Q5T0T0 291 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 ABHD15Q6UXT9 468 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 RUFY4Q6ZNE9 571 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 SERINC5Q86VE9 423 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 LMBR1Q8WVP7 490 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 GLG1Q92896 1179 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 ZNF577Q9BSK1 485 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 MYH9P35579 1960 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-213ENST00000571886 EMSYQ7Z589 1322 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 PTPRSQ13332 1948 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 SELPP16109 830 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 STAT5BP51692 787 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 NR5A1Q13285 461 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 PLCB4Q15147 1175 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 GALNT17Q6IS24 598 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 PSRC1Q6PGN9 363 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 LRRC8DQ7L1W4 858 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 CCDC60Q8IWA6 550 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 RPUSD2Q8IZ73 545 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 AFAP1L1Q8TED9 768 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 TRAPPC12Q8WVT3 735 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 FAM161BQ96MY7 647 aa11.62□□□□□ -0.55
GTF3C1-213ENST00000571886 MBOAT7Q96N66 472 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms