RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	LCOR	Q96JN0	433 aa	Predicted RBP	5.25	□□□□□ -1.57
CDC27-213	ENST00000571643	SPATA9	Q9BWV2	254 aa		5.25	□□□□□ -1.57
CDC27-213	ENST00000571643	L2HGDH	Q9H9P8	463 aa		5.25	□□□□□ -1.57
CDC27-213	ENST00000571643	CUL7	Q14999	1698 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	FAM47E-STBD1	D6RA91	191 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	CYP1A1	P04798	512 aa	Predicted RBP	5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	CHGB	P05060	677 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	SUMO1	P63165	101 aa	Known RBP	5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	EFEMP1	Q12805	493 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	ZNF827	Q17R98	1081 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	VASN	Q6EMK4	673 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	UHMK1	Q8TAS1	419 aa	Known RBP	5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	PIP4K2C	Q8TBX8	421 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	OSBP2	Q969R2	916 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	CDIP1	Q9H305	208 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	DLL4	Q9NR61	685 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	ADAMTS12	P58397	1594 aa		5.24	□□□□□ -1.57
CDC27-213	ENST00000571643	PRICKLE3	O43900	615 aa	Predicted RBP	5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	MSC	O60682	206 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	PLAT	P00750	562 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	LRG1	P02750	347 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	LONRF2	Q1L5Z9	754 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	LRP10	Q7Z4F1	713 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	SCUBE1	Q8IWY4	988 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	TXNDC5	Q8NBS9	432 aa	Known RBP	5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	CDC6	Q99741	560 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	TMEM168	Q9H0V1	697 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	FTSJ1	Q9UET6	329 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	GRIN2A	Q12879	1464 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	CLASP1	Q7Z460	1538 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	NUP160	Q12769	1436 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	EEA1	Q15075	1411 aa		5.23	□□□□□ -1.57
CDC27-213	ENST00000571643	LOC105371045	A0A1W2PR82	267 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	DDX3X	O00571	662 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	SLC27A2	O14975	620 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	SOD2	P04179	222 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	NFKB2	Q00653	900 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	SSRP1	Q08945	709 aa	Known RBP	5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	NTRK3	Q16288	839 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	HABP4	Q5JVS0	413 aa	Known RBP	5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	SOGA3	Q5TF21	947 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	MCTP2	Q6DN12	878 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	FERMT3	Q86UX7	667 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	TTC9B	Q8N6N2	239 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	DDX1	Q92499	740 aa	Known RBP	5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	PTPRN2	Q92932	1015 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	JAM3	Q9BX67	310 aa		5.22	□□□□□ -1.57
CDC27-213	ENST00000571643	TRBV23-1	A0A0A0MS06	115 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	ITGB3	P05106	788 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	TUSC3	Q13454	348 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	SF3A1	Q15459	793 aa	Known RBP	5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	KCNT2	Q6UVM3	1135 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	MTDH	Q86UE4	582 aa	Known RBP	5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	STK32C	Q86UX6	486 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	ZSWIM3	Q96MP5	696 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	YTHDC1	Q96MU7	727 aa	Known RBP	5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	BARX1	Q9HBU1	254 aa	Predicted RBP	5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	CROT	Q9UKG9	612 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	DSE	Q9UL01	958 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	DUSP10	Q9Y6W6	482 aa		5.21	□□□□□ -1.58
CDC27-213	ENST00000571643	CARMIL1	Q5VZK9	1371 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	ARHGEF11	O15085	1522 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	GSTA4	O15217	222 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	FAH	P16930	419 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	IL13	P35225	146 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	EPHA5	P54756	1037 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	GABRE	P78334	506 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	PAK1	Q13153	545 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	PAN2	Q504Q3	1202 aa	Known RBP	5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	TRMT10B	Q6PF06	316 aa	Known RBP	5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	KCTD1	Q719H9	257 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	NLGN4X	Q8N0W4	816 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	KLHL36	Q8N4N3	616 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	DTX3	Q8N9I9	347 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	SAMD11	Q96NU1	681 aa		5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.2	□□□□□ -1.58
CDC27-213	ENST00000571643	KIAA0586	Q9BVV6	1533 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	WNT9A	O14904	365 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	LAMTOR5	O43504	91 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	ADCY3	O60266	1144 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	FBXO21	O94952	628 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	ENO2	P09104	434 aa	Predicted RBP	5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	CDK11B	P21127	795 aa	Known RBP	5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	GJA4	P35212	333 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	SMAD2	Q15796	467 aa	Known RBP	5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	FAM47C	Q5HY64	1035 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	PKN3	Q6P5Z2	889 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	GLB1L	Q6UWU2	654 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	TMC5	Q6UXY8	1006 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	SPATC1	Q76KD6	591 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	KCNJ15	Q99712	375 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	SYT3	Q9BQG1	590 aa		5.19	□□□□□ -1.58
CDC27-213	ENST00000571643	IPPK	Q9H8X2	491 aa		5.19	□□□□□ -1.58

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