RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 UBTFL1P0CB47 393 aaPredicted RBP8.3□□□□□ -1.08
CHD3-213ENST00000571249 RFX1P22670 979 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 CERS3Q8IU89 383 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 C12orf76Q8N812 135 aaPredicted RBP8.3□□□□□ -1.08
CHD3-213ENST00000571249 PRPF38AQ8NAV1 312 aaKnown RBP8.3□□□□□ -1.08
CHD3-213ENST00000571249 ZBTB44Q8NCP5 570 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 GATA6Q92908 595 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 ALG1Q9BT22 464 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 FOXQ1Q9C009 403 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 GZF1Q9H116 711 aaPredicted RBP8.3□□□□□ -1.08
CHD3-213ENST00000571249 PRKRIP1Q9H875 184 aaPredicted RBP8.3□□□□□ -1.08
CHD3-213ENST00000571249 KCNK12Q9HB15 430 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 GMEB2Q9UKD1 530 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 MTMR7Q9Y216 660 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 CACNA1FO60840 1977 aa8.3□□□□□ -1.08
CHD3-213ENST00000571249 PRB1P04280 392 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 ZAP70P43403 619 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
CHD3-213ENST00000571249 PDE4CQ08493 712 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 APOBRQ0VD83 1088 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 TTC39AQ5SRH9 613 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 TSSK4Q6SA08 328 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 C7orf31Q8N865 590 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 MORC4Q8TE76 937 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 AFG1LQ8WV93 481 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 RSAD2Q8WXG1 361 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 ADAM7Q9H2U9 754 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 ACAD9Q9H845 621 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 CYP26B1Q9NR63 512 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 AAASQ9NRG9 546 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 SEMA4GQ9NTN9 838 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 CACNA2D2Q9NY47 1150 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 SWAP70Q9UH65 585 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 WASF3Q9UPY6 502 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 PCDHGA2Q9Y5H1 932 aa8.29□□□□□ -1.08
CHD3-213ENST00000571249 HIDE1A8MVS5 230 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 LILRB5O75023 590 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 IGSF3O75054 1194 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 IDH1O75874 414 aaKnown RBP8.28□□□□□ -1.08
CHD3-213ENST00000571249 KCNK5O95279 499 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 ARIH2O95376 493 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 CTSHP09668 335 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 HOXB8P17481 243 aaPredicted RBP8.28□□□□□ -1.08
CHD3-213ENST00000571249 PDE4BQ07343 736 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 FOXC1Q12948 553 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 ZNF528Q3MIS6 628 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 PAN2Q504Q3 1202 aaKnown RBP8.28□□□□□ -1.08
CHD3-213ENST00000571249 NAALADL2Q58DX5 795 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 MUM1L1Q5H9M0 696 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 IL31Q6EBC2 164 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 DDX1Q92499 740 aaKnown RBP8.28□□□□□ -1.08
CHD3-213ENST00000571249 YTHDC1Q96MU7 727 aaKnown RBP8.28□□□□□ -1.08
CHD3-213ENST00000571249 NECTIN4Q96NY8 510 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 CDCA3Q99618 268 aaPredicted RBP8.28□□□□□ -1.08
CHD3-213ENST00000571249 ADAM33Q9BZ11 813 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 KANSL2Q9H9L4 492 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 RNF146Q9NTX7 359 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 SPATA6Q9NWH7 488 aaPredicted RBP8.28□□□□□ -1.08
CHD3-213ENST00000571249 WNT16Q9UBV4 365 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 RAD50Q92878 1312 aa8.28□□□□□ -1.08
CHD3-213ENST00000571249 TMEM8BA6NDV4 472 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 EIF4E1BA6NMX2 242 aaKnown RBP8.27□□□□□ -1.09
CHD3-213ENST00000571249 GIPC1O14908 333 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 TBC1D4O60343 1298 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 DGKIO75912 1065 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 EOMESO95936 686 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 PSEN2P49810 448 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 OAZ1P54368 228 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 COL28A1Q2UY09 1125 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 CCDC158Q5M9N0 1113 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 RARS2Q5T160 578 aaKnown RBP8.27□□□□□ -1.09
CHD3-213ENST00000571249 PLPP4Q5VZY2 271 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 CES5AQ6NT32 575 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 MRPL50Q8N5N7 158 aaKnown RBP8.27□□□□□ -1.09
CHD3-213ENST00000571249 CCDC17Q96LX7 622 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 TRERF1Q96PN7 1200 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 RIOK1Q9BRS2 568 aaKnown RBP8.27□□□□□ -1.09
CHD3-213ENST00000571249 RXFP3Q9NSD7 469 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 ZSCAN32Q9NX65 697 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 CYP39A1Q9NYL5 469 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 DBR1Q9UK59 544 aaKnown RBP8.27□□□□□ -1.09
CHD3-213ENST00000571249 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.09
CHD3-213ENST00000571249 NOTCH2Q04721 2471 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 PLXNA4Q9HCM2 1894 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 MYO5AQ9Y4I1 1855 aaKnown RBP8.26□□□□□ -1.09
CHD3-213ENST00000571249 F5H6K3 240 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 ENPP3O14638 875 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 FSCN2O14926 492 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 LAMTOR5O43504 91 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 KRT38O76015 456 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 NDUFB10O96000 172 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 SRGAP2BP0DMP2 458 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 TXNP10599 105 aaKnown RBP8.26□□□□□ -1.09
CHD3-213ENST00000571249 GATMP50440 423 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 SNAP25P60880 206 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 KLRC3Q07444 240 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 PPP2R5BQ15173 497 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 PSAPL1Q6NUJ1 521 aa8.26□□□□□ -1.09
CHD3-213ENST00000571249 CHST3Q7LGC8 479 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms