RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PRMT2P55345 433 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 TTLL4Q14679 1199 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 OLFML2BQ68BL8 750 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 KCNV1Q6PIU1 500 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CLEC17AQ6ZS10 378 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 EEPD1Q7L9B9 569 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 VSIG10LQ86VR7 867 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 TMEM87AQ8NBN3 555 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 ERMNQ8TAM6 284 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 SCFD2Q8WU76 684 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CRYGNQ8WXF5 182 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 MRPS27Q92552 414 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CCDC34Q96HJ3 373 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CDK5RAP3Q96JB5 506 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CHAMP1Q96JM3 812 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 INPP4AQ96PE3 977 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 TINF2Q9BSI4 451 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 WDR11Q9BZH6 1224 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 KCNMB3Q9NPA1 279 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 KCNH7Q9NS40 1196 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 TBC1D22BQ9NU19 505 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 SRRDQ9UH36 339 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 SAMM50Q9Y512 469 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 UBIAD1Q9Y5Z9 338 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 MORC2Q9Y6X9 1032 aaPredicted RBP7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 PLXNB2O15031 1838 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 IGLV3-22A0A075B6J6 115 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 MEIS1O00470 390 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 NOP56O00567 594 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 MSH4O15457 936 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 PRPF40AO75400 957 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 MBD3O95983 291 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 HMGCRP04035 888 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 ITGB5P18084 799 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 MCM4P33991 863 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 UBE2HP62256 183 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 MRPS9P82933 396 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 KRT76Q01546 638 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 NEDD9Q14511 834 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 PTPAQ15257 358 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 KRT79Q5XKE5 535 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 NCAPH2Q6IBW4 605 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 MAMDC4Q6UXC1 1216 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 FSIP1Q8NA03 581 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 NPLOC4Q8TAT6 608 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 ETNPPLQ8TBG4 499 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 LENG9Q96B70 501 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 FGD4Q96M96 766 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 AK8Q96MA6 479 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 CCDC43Q96MW1 224 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 MBOAT7Q96N66 472 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 RIT2Q99578 217 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 PYM1Q9BRP8 204 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 TMEM60Q9H2L4 133 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 ABHD16BQ9H3Z7 469 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 TTC12Q9H892 705 aaPredicted RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 JPH1Q9HDC5 661 aaPredicted RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 WBP1LQ9NX94 342 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 LRWD1Q9UFC0 647 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 FBXO2Q9UK22 296 aaPredicted RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 RCOR1Q9UKL0 485 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 PCDHA12Q9UN75 941 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 TRIM17Q9Y577 477 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 SRPRBQ9Y5M8 271 aaKnown RBP7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 ASTN1O14525 1302 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 KDM3AQ9Y4C1 1321 aa7.41□□□□□ -1.22
CTDNEP1-204ENST00000570484 A0A1W2PQ27 194 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 A0A1W2PQ64 194 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 A0A1W2PQD8 194 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 WDR64B1ANS9 1081 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 NKRFO15226 690 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 ARP10275 920 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 TXNP10599 105 aaKnown RBP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 TGFB3P10600 412 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 UBA1P22314 1058 aaKnown RBP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 CTGFP29279 349 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 SFNP31947 248 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 CYP2C19P33261 490 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 UBA7P41226 1012 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 TECP42680 631 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 GCGRP47871 477 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 CTCFP49711 727 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 JAK3P52333 1124 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 SP4Q02446 784 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 IRF5Q13568 498 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 ZRSR1Q15695 479 aaKnown RBP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 ADALQ6DHV7 355 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 MIER3Q7Z3K6 550 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 CYP2W1Q8TAV3 490 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 MORC4Q8TE76 937 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 SNX29Q8TEQ0 813 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 USP6NLQ92738 828 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 SYMPKQ92797 1274 aaKnown RBP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 SLC5A5Q92911 643 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 SYAP1Q96A49 352 aaPredicted RBP7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 CALML4Q96GE6 196 aa7.4□□□□□ -1.22
CTDNEP1-204ENST00000570484 UIMC1Q96RL1 719 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms