RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 JAM3Q9BX67 310 aa4.93□□□□□ -1.62
UBR1-211ENST00000569971 CDIP1Q9H305 208 aa4.93□□□□□ -1.62
UBR1-211ENST00000569971 VTA1Q9NP79 307 aa4.93□□□□□ -1.62
UBR1-211ENST00000569971 CATSPERZQ9NTU4 200 aa4.93□□□□□ -1.62
UBR1-211ENST00000569971 SPTLC3Q9NUV7 552 aa4.93□□□□□ -1.62
UBR1-211ENST00000569971 RTEL1Q9NZ71 1219 aa4.93□□□□□ -1.62
UBR1-211ENST00000569971 CBLCQ9ULV8 474 aa4.93□□□□□ -1.62
UBR1-211ENST00000569971 APOBEC2Q9Y235 224 aaKnown RBP4.93□□□□□ -1.62
UBR1-211ENST00000569971 MYOCOSA0A1B0GUC4 107 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 A0A1W2PQ27 194 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 A0A1W2PQ64 194 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 A0A1W2PQC6 194 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 A0A1W2PQD8 194 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 GABRDO14764 452 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 GSTA4O15217 222 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 MYO1BO43795 1136 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 PPP1R11O60927 126 aaPredicted RBP4.92□□□□□ -1.62
UBR1-211ENST00000569971 PRKD3O94806 890 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 GRK2P25098 689 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 GRK3P35626 688 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 LSSP48449 732 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 RPL11P62913 178 aaKnown RBP4.92□□□□□ -1.62
UBR1-211ENST00000569971 FAM47CQ5HY64 1035 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 SYDE2Q5VT97 1194 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 OLFML2BQ68BL8 750 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 IQSEC1Q6DN90 963 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 DBX2Q6ZNG2 339 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 OSTM1Q86WC4 334 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 C2orf69Q8N8R5 385 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 ZCCHC4Q9H5U6 513 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 KCNK12Q9HB15 430 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 EMC7Q9NPA0 242 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 AASDHPPTQ9NRN7 309 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 BTG4Q9NY30 223 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 CLDND1Q9NY35 253 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 H2AFY2Q9P0M6 372 aaPredicted RBP4.92□□□□□ -1.62
UBR1-211ENST00000569971 CNOT6Q9ULM6 557 aaKnown RBP4.92□□□□□ -1.62
UBR1-211ENST00000569971 GOLGA3Q08378 1498 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 TNKSO95271 1327 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 HMGXB3Q12766 1538 aa4.92□□□□□ -1.62
UBR1-211ENST00000569971 TNIKQ9UKE5 1360 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 SOGA1O94964 1423 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 WTIPA6NIX2 430 aaPredicted RBP4.91□□□□□ -1.62
UBR1-211ENST00000569971 NPHS1O60500 1241 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 PDE6AP16499 860 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 SYN1P17600 705 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 ARL4AP40617 200 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 KIR2DL1P43626 348 aaPredicted RBP4.91□□□□□ -1.62
UBR1-211ENST00000569971 KIR2DL2P43627 348 aaPredicted RBP4.91□□□□□ -1.62
UBR1-211ENST00000569971 CEBPAP49715 358 aaPredicted RBP4.91□□□□□ -1.62
UBR1-211ENST00000569971 KPNA1P52294 538 aaPredicted RBP4.91□□□□□ -1.62
UBR1-211ENST00000569971 TMEM132EQ6IEE7 984 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 CEP68Q76N32 757 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 MARCH10Q8NA82 808 aaPredicted RBP4.91□□□□□ -1.62
UBR1-211ENST00000569971 CXorf38Q8TB03 319 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 HOOK2Q96ED9 719 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 BORCS6Q96GS4 357 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 C8orf48Q96LL4 319 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 OXSMQ9NWU1 459 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 ERVK13-1Q9NX77 482 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 ZIM2Q9NZV7 527 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 GPR160Q9UJ42 338 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 JAG2Q9Y219 1238 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 ZNF281Q9Y2X9 895 aa4.91□□□□□ -1.62
UBR1-211ENST00000569971 CEP162Q5TB80 1403 aa4.9□□□□□ -1.62
UBR1-211ENST00000569971 CEP164Q9UPV0 1460 aa4.9□□□□□ -1.62
UBR1-211ENST00000569971 A0A0G2JLL6 359 aaPredicted RBP4.9□□□□□ -1.63
UBR1-211ENST00000569971 SCGB1D2O95969 90 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 COL6A2P12110 1019 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 KRT15P19012 456 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 PDE6BP35913 854 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 JAM2P57087 298 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 LACTBP83111 547 aaPredicted RBP4.9□□□□□ -1.63
UBR1-211ENST00000569971 TMEM62Q0P6H9 643 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 NFIXQ14938 502 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 CRY1Q16526 586 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 ERICH6BQ5W0A0 696 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 HLA-DQA1Q5Y7H0 255 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 CREB3L3Q68CJ9 461 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 CYP2R1Q6VVX0 501 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 HDGFL2Q7Z4V5 671 aaPredicted RBP4.9□□□□□ -1.63
UBR1-211ENST00000569971 ZNF605Q86T29 641 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 ZBTB46Q86UZ6 589 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 C11orf74Q86VG3 221 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 NLRP10Q86W26 655 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 PASD1Q8IV76 773 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 CHPFQ8IZ52 775 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 LINC01599Q8WXQ3 324 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 CHMP4CQ96CF2 233 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 TMEM169Q96HH4 297 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 GCM1Q9NP62 436 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 GEMIN8Q9NWZ8 242 aaKnown RBP4.9□□□□□ -1.63
UBR1-211ENST00000569971 TNFRSF10DQ9UBN6 386 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 GULP1Q9UBP9 304 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 ARID4BQ4LE39 1312 aaPredicted RBP4.9□□□□□ -1.63
UBR1-211ENST00000569971 SYNJ1O43426 1573 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 KIF21BO75037 1637 aa4.9□□□□□ -1.63
UBR1-211ENST00000569971 NCAPD3P42695 1498 aa4.89□□□□□ -1.63
UBR1-211ENST00000569971 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.89□□□□□ -1.63
UBR1-211ENST00000569971 A0A1W2PQJ5 194 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms