RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 STX8Q9UNK0 236 aa9.75□□□□□ -0.85
SNX29-208ENST00000569801 LAMA4Q16363 1823 aa9.75□□□□□ -0.85
SNX29-208ENST00000569801 POLQO75417 2590 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 TSPY2A6NKD2 308 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 TMEM232C9JQI7 657 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 ORC4O43929 436 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 ZBED4O75132 1171 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 FGAP02671 866 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 RFX1P22670 979 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 NOVP48745 357 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 OAZ1P54368 228 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 GJA9P57773 515 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 ALX1Q15699 326 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 CSRP2Q16527 193 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 LPAL2Q16609 132 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNX29-208ENST00000569801 RETREG2Q8NC44 543 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 CHMP4CQ96CF2 233 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 GMCL1Q96IK5 515 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 FGD4Q96M96 766 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 ALDH8A1Q9H2A2 487 aaPredicted RBP9.74□□□□□ -0.85
SNX29-208ENST00000569801 RNF39Q9H2S5 420 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 RWDD1Q9H446 243 aaPredicted RBP9.74□□□□□ -0.85
SNX29-208ENST00000569801 TRMT13Q9NUP7 481 aaKnown RBP9.74□□□□□ -0.85
SNX29-208ENST00000569801 CNPY2Q9Y2B0 182 aa9.74□□□□□ -0.85
SNX29-208ENST00000569801 TRIM6-TRIM34B2RNG4 842 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 RANBP6O60518 1105 aaKnown RBP9.73□□□□□ -0.85
SNX29-208ENST00000569801 WISP1O95388 367 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 SNAI1O95863 264 aaPredicted RBP9.73□□□□□ -0.85
SNX29-208ENST00000569801 CAPNS1P04632 268 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 SUPT20HL2P0C7V6 817 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 HSPD1P10809 573 aaKnown RBP9.73□□□□□ -0.85
SNX29-208ENST00000569801 MCCP23508 829 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 SLC1A4P43007 532 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 STAT2P52630 851 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 LIMK1P53667 647 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 BEX3Q00994 111 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 ZNF252P-AS1Q0IIN9 211 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 MAMDC4Q6UXC1 1216 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 KCTD1Q719H9 257 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 CHD1LQ86WJ1 897 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 TICAM2Q86XR7 235 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 PLEKHM2Q8IWE5 1019 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 ZBTB44Q8NCP5 570 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 STAG1Q8WVM7 1258 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 DDX11Q96FC9 970 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 UPF3AQ9H1J1 476 aaKnown RBP9.73□□□□□ -0.85
SNX29-208ENST00000569801 DLGAP2Q9P1A6 1054 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 CTDP1Q9Y5B0 961 aaPredicted RBP9.73□□□□□ -0.85
SNX29-208ENST00000569801 LCTP09848 1927 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 ZMYM6O95789 1325 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 CCDC171Q6TFL3 1326 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 COL12A1Q99715 3063 aa9.73□□□□□ -0.85
SNX29-208ENST00000569801 RELNP78509 3460 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 FANCMQ8IYD8 2048 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 GIPC1O14908 333 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 ATXN7O15265 892 aaPredicted RBP9.72□□□□□ -0.85
SNX29-208ENST00000569801 CTAGE5O15320 804 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 PLA2G6O60733 806 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 LILRB5O75023 590 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 CABYRO75952 493 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 RETP07949 1114 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 FDX1P10109 184 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 SDSP20132 328 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 HAND2P61296 217 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 PSMC6P62333 389 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 HTRA4P83105 476 aaPredicted RBP9.72□□□□□ -0.85
SNX29-208ENST00000569801 NUCB1Q02818 461 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 PPP4R3BQ5MIZ7 849 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 RCSD1Q6JBY9 416 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
SNX29-208ENST00000569801 ADGRD2Q7Z7M1 963 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 FAM160B2Q86V87 743 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 ANKRD35Q8N283 1001 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 MSL3Q8N5Y2 521 aaKnown RBP9.72□□□□□ -0.85
SNX29-208ENST00000569801 CHST13Q8NET6 341 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 PPP2R3CQ969Q6 453 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 RILPL2Q969X0 211 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 SEZ6LQ9BYH1 1024 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 HOMER2Q9NSB8 354 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 FBXO40Q9UH90 709 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 ZHX1Q9UKY1 873 aaPredicted RBP9.72□□□□□ -0.85
SNX29-208ENST00000569801 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 ISY1Q9ULR0 285 aaKnown RBP9.72□□□□□ -0.85
SNX29-208ENST00000569801 NAV3Q8IVL0 2385 aa9.72□□□□□ -0.85
SNX29-208ENST00000569801 ADCY6O43306 1168 aa9.71□□□□□ -0.86
SNX29-208ENST00000569801 NRIP1P48552 1158 aa9.71□□□□□ -0.86
SNX29-208ENST00000569801 NOVA1P51513 510 aaKnown RBP9.71□□□□□ -0.86
SNX29-208ENST00000569801 SNAP25P60880 206 aa9.71□□□□□ -0.86
SNX29-208ENST00000569801 CSTF1Q05048 431 aaKnown RBP9.71□□□□□ -0.86
SNX29-208ENST00000569801 TCTN1Q2MV58 587 aa9.71□□□□□ -0.86
SNX29-208ENST00000569801 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.86
SNX29-208ENST00000569801 RBM23Q86U06 439 aaKnown RBP9.71□□□□□ -0.86
SNX29-208ENST00000569801 POTEDQ86YR6 584 aa9.71□□□□□ -0.86
SNX29-208ENST00000569801 TBC1D10CQ8IV04 446 aa9.71□□□□□ -0.86
SNX29-208ENST00000569801 FAM133AQ8N9E0 248 aa9.71□□□□□ -0.86
SNX29-208ENST00000569801 CHURC1Q8WUH1 139 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms