RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 LGR5O75473 907 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 ATG7O95352 703 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 CSF2RAP15509 400 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 CYP3A7P24462 503 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 SETQ01105 290 aaPredicted RBP12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 SHHQ15465 462 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 C16orf59Q7L2K0 433 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 TMEM199Q8N511 208 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 VWCEQ96DN2 955 aa12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 LLPHQ9BRT6 129 aaKnown RBP12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 ZNF215Q9UL58 517 aaPredicted RBP12.59□□□□□ -0.39
SHCBP1-207ENST00000569702 CCNE2O96020 404 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 SMIM10L2AP0DMW4 78 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 SMIM10L2BP0DMW5 78 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 CCL23P55773 120 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 ACTR2P61160 394 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 ADAM17P78536 824 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 RBL2Q08999 1139 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 PPIGQ13427 754 aaKnown RBP eCLIP12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 PRR16Q569H4 304 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 UTP14CQ5TAP6 766 aaKnown RBP12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 KRT25Q7Z3Z0 450 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 CCDC83Q8IWF9 413 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 OXER1Q8TDS5 423 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 DHX38Q92620 1227 aaKnown RBP12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 MBOAT7Q96N66 472 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 PCYT2Q99447 389 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 ZNF577Q9BSK1 485 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 BACH2Q9BYV9 841 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 RNPEPQ9H4A4 650 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 TBC1D22BQ9NU19 505 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 ERAP1Q9NZ08 941 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 NOD1Q9Y239 953 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 EMSYQ7Z589 1322 aa12.58□□□□□ -0.4
SHCBP1-207ENST00000569702 IGKV6D-21A0A0A0MT36 114 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 SOX1O00570 391 aaPredicted RBP12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 IQCF3P0C7M6 154 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 PTK7Q13308 1070 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 BFSP2Q13515 415 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 NONOQ15233 471 aaKnown RBP eCLIP12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 TRIM71Q2Q1W2 868 aaKnown RBP12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 Q4G0T1 1027 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 TMEM240Q5SV17 173 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 MOXD1Q6UVY6 613 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 ABHD15Q6UXT9 468 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 CAGE1Q8TC20 777 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 TNFRSF25Q93038 417 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.57□□□□□ -0.45e-6■■■□□ 16.3
SHCBP1-207ENST00000569702 SMARCAD1Q9H4L7 1026 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 IL23AQ9NPF7 189 aa12.57□□□□□ -0.4
SHCBP1-207ENST00000569702 TRIP12Q14669 1992 aaPredicted RBP12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 CCDC194A0A1B0GVG4 234 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 C17orf102A2RUQ5 167 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 MSH4O15457 936 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 ST18O60284 1047 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 TDP2O95551 362 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 MMP1P03956 469 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 ACRP10323 421 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 INF2Q27J81 1249 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 RASIP1Q5U651 963 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 PLPPR4Q7Z2D5 763 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 SERINC5Q86VE9 423 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 CCDC155Q8N6L0 562 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 RETREG2Q8NC44 543 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 AFAP1L1Q8TED9 768 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 GLG1Q92896 1179 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 SLC5A5Q92911 643 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 WNT8BQ93098 351 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 SCLYQ96I15 445 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 UIMC1Q96RL1 719 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 SETD4Q9NVD3 440 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 NRCAMQ92823 1304 aa12.56□□□□□ -0.4
SHCBP1-207ENST00000569702 DDX39AO00148 427 aaKnown RBP12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 TREHO43280 583 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 CD2BP2O95400 341 aaKnown RBP12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 GNAT1P11488 350 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 CKBP12277 381 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 RFC2P35250 354 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 KRT2P35908 639 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 SLC26A2P50443 739 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 HMGN5P82970 282 aaKnown RBP12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 KRT76Q01546 638 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 NR5A1Q13285 461 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 GPNMBQ14956 572 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 KRT40Q6A162 431 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 PPP4R3AQ6IN85 833 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 ZNF746Q6NUN9 644 aaPredicted RBP12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 PSRC1Q6PGN9 363 aaPredicted RBP12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 TRAF7Q6Q0C0 670 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 ZNF365Q70YC5 407 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 RPUSD2Q8IZ73 545 aaKnown RBP12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 RIT2Q99578 217 aa12.55□□□□□ -0.4
SHCBP1-207ENST00000569702 AZI2Q9H6S1 392 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms