RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SLKQ9H2G2 1235 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 RNPEPQ9H4A4 650 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 EMSYQ7Z589 1322 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 CPLX1O14810 134 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 CAND2O75155 1236 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 CDKL5O76039 1030 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 CXCL10P02778 98 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 SMIM10L2AP0DMW4 78 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 SMIM10L2BP0DMW5 78 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 FDPSP14324 419 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 NEK4P51957 841 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 ITGB3BPQ13352 177 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 BFSP2Q13515 415 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 JAKMIP3Q5VZ66 844 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 MOXD1Q6UVY6 613 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 ZNF365Q70YC5 407 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 PLPPR4Q7Z2D5 763 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 SERINC5Q86VE9 423 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 C7orf31Q8N865 590 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 AFAP1L1Q8TED9 768 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 GTF3C6Q969F1 213 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 PGBD1Q96JS3 809 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 C22orf23Q9BZE7 217 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 PPP1R12CQ9BZL4 782 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 VPS54Q9P1Q0 977 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 SLC9A2Q9UBY0 812 aa9.33□□□□□ -0.92
HDGFL3-205ENST00000568129 NRCAMQ92823 1304 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 TMEM265A0A087WTH1 108 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 MBLAC1A4D2B0 266 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 NOP56O00567 594 aaKnown RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 LARGE1O95461 756 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 FGBP02675 491 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 CKBP12277 381 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 TCF7P36402 384 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 CCL23P55773 120 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 NLRP5P59047 1200 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 ZNF200P98182 395 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 SETQ01105 290 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 ST3GAL1Q11201 340 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 STK3Q13188 491 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 MKRN4PQ13434 485 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 Q4G0T1 1027 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 FAM47CQ5HY64 1035 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 FAM26DQ5JW98 314 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 B3GNT9Q6UX72 402 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 ABHD15Q6UXT9 468 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 PLA2G4DQ86XP0 818 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 BLIDQ8IZY5 108 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 CCDC155Q8N6L0 562 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 NSUN7Q8NE18 718 aaKnown RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 PPP1R13LQ8WUF5 828 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 WNT8BQ93098 351 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 AIFM3Q96NN9 605 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 ALG1Q9BT22 464 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 SMARCAD1Q9H4L7 1026 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 JPH1Q9HDC5 661 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 TBC1D22BQ9NU19 505 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 ERAP1Q9NZ08 941 aa9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 ZNF215Q9UL58 517 aaPredicted RBP9.32□□□□□ -0.92
HDGFL3-205ENST00000568129 TTC3P53804 2025 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 C17orf102A2RUQ5 167 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 IPO5O00410 1097 aaKnown RBP9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 SORBS3O60504 671 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 PPFIA3O75145 1194 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 CCNE2O96020 404 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 ACRP10323 421 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 GNAT1P11488 350 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 SELPP16109 830 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 SLC26A2P50443 739 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 ACTR2P61160 394 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 MARCH8Q5T0T0 291 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 ZNF746Q6NUN9 644 aaPredicted RBP9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 RASGRP4Q8TDF6 673 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 TNFRSF25Q93038 417 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 SCLYQ96I15 445 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 RNPC3Q96LT9 517 aaKnown RBP9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 SDF4Q9BRK5 362 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 MTMR10Q9NXD2 777 aa9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 CXXC1Q9P0U4 656 aaPredicted RBP9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 MAFBQ9Y5Q3 323 aaPredicted RBP9.31□□□□□ -0.92
HDGFL3-205ENST00000568129 COL6A3P12111 3177 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 RRN3P2A6NIE6 340 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 TREHO43280 583 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 NBNO60934 754 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 ZNF76P36508 570 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 MBTPS1Q14703 1052 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 PPP4R3AQ6IN85 833 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 LRRC8DQ7L1W4 858 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 TRIM50Q86XT4 487 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 NECAB1Q8N987 351 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 PHOSPHO2Q8TCD6 241 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 TBCKQ8TEA7 893 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 WASF1Q92558 559 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 SLC5A5Q92911 643 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 ATP6V0A1Q93050 837 aa9.3□□□□□ -0.92
HDGFL3-205ENST00000568129 RIT2Q99578 217 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms