RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 NFIBO00712 420 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 GSTA4O15217 222 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 MAFKO60675 156 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 ZBTB48P10074 688 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 ST5P78524 1137 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 HTRA3P83110 453 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 PCBP1Q15365 356 aaKnown RBP eCLIP5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 TEPPQ6URK8 271 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 TRIM48Q8IWZ4 208 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 SMARCC2Q8TAQ2 1214 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 SLC38A3Q99624 504 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 GORASP1Q9BQQ3 440 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 ORAI3Q9BRQ5 295 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 RBPJLQ9UBG7 517 aa5.68□□□□□ -1.5
HERPUD1-212ENST00000567944 DBX1A6NMT0 343 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 B4E1Z4 1266 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 CBX4O00257 560 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 DVL2O14641 736 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 PI3P19957 117 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 LINC00310P59036 64 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 DLX2Q07687 328 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 RTP5Q14D33 572 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 SEPT7Q16181 437 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 KCNA10Q16322 511 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 FIGNQ5HY92 759 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 PIK3R6Q5UE93 754 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 CREB3L3Q68CJ9 461 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 ZNF662Q6ZS27 426 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 DDX11Q96FC9 970 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 TOE1Q96GM8 510 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 KCTD3Q9Y597 815 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 IRAK3Q9Y616 596 aa5.67□□□□□ -1.5
HERPUD1-212ENST00000567944 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 TCAF2A6NFQ2 919 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 NPIPB6E9PJ23 425 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 CLASP2O75122 1294 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 C4BPAP04003 597 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 FAHP16930 419 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 PFKLP17858 780 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 PTPN1P18031 435 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 RAP1GAPP47736 663 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 MASP1P48740 699 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 SKOR2Q2VWA4 1001 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 CFAP100Q494V2 611 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 PAN2Q504Q3 1202 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 CPZQ66K79 652 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 CNNM4Q6P4Q7 775 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 CD300LDQ6UXZ3 194 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 DDX53Q86TM3 631 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 THNSL2Q86YJ6 484 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 C1QL4Q86Z23 238 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 NLGN4XQ8N0W4 816 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 LINC00482Q8N8I6 264 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 FNIP1Q8TF40 1166 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 DLG3Q92796 817 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 DACT3Q96B18 629 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 ATP23Q9Y6H3 246 aa5.66□□□□□ -1.5
HERPUD1-212ENST00000567944 KPNA6O60684 536 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 MYCLP1P12525 358 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 ITGA1P56199 1179 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 ADAM9Q13443 819 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 VWA3BQ502W6 1294 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 BTBD8Q5XKL5 378 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 PKN3Q6P5Z2 889 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 LIPIQ6XZB0 460 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 RNF180Q86T96 592 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 ANKLE2Q86XL3 938 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 CHST14Q8NCH0 376 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 WNK4Q96J92 1243 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 B4GALT6Q9UBX8 382 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 CNOT6Q9ULM6 557 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 B3GALT1Q9Y5Z6 326 aa5.65□□□□□ -1.5
HERPUD1-212ENST00000567944 SBNO2Q9Y2G9 1366 aa5.65□□□□□ -1.51
HERPUD1-212ENST00000567944 SLC12A8A0AV02 714 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 RASSF10A6NK89 507 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 ZNF891A8MT65 544 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 PDE8AO60658 829 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 CYP2C8P10632 490 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 DSG1Q02413 1049 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 CNKSR3Q6P9H4 555 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 STK32CQ86UX6 486 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 C2orf69Q8N8R5 385 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 PWWP2AQ96N64 755 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 C11orf84Q9BUA3 381 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 SPATA6Q9NWH7 488 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 NUB1Q9Y5A7 615 aa5.64□□□□□ -1.51
HERPUD1-212ENST00000567944 PTPDC1A2A3K4 754 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 SCDO00767 359 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 FFAR3O14843 346 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 F2P00734 622 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 VIL1P09327 827 aaKnown RBP5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 CFPP27918 469 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 NEK4P51957 841 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 NKX3-2P78367 333 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 DBPQ10586 325 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 CD276Q5ZPR3 534 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 UBE2R2Q712K3 238 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 ZC3H18Q86VM9 953 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms