RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 GPR155Q7Z3F1 870 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.33□□□□□ -1.56
CDH1-211ENST00000567320 MCF2L2Q86YR7 1114 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 STPG3Q8N7X2 389 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 TTLL11Q8NHH1 800 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 LRRC37BQ96QE4 947 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 ALG1Q9BT22 464 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 PABPC1P11940 636 aaKnown RBP5.32□□□□□ -1.56
CDH1-211ENST00000567320 PFKPQ01813 784 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 ZNF568Q3ZCX4 644 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 LBX2Q6XYB7 198 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 EP400NLQ6ZTU2 488 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 Q6ZUG5 572 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 USP51Q70EK9 711 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 IFNL3Q8IZI9 196 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 DTX3Q8N9I9 347 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 GIMAP8Q8ND71 665 aaPredicted RBP5.32□□□□□ -1.56
CDH1-211ENST00000567320 UHMK1Q8TAS1 419 aaKnown RBP5.32□□□□□ -1.56
CDH1-211ENST00000567320 SGSM3Q96HU1 749 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 VPS11Q9H270 941 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 ADAM29Q9UKF5 820 aa5.32□□□□□ -1.56
CDH1-211ENST00000567320 TRAV20A0A0B4J274 112 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 FAM47E-STBD1D6RA91 191 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 H0Y858 1186 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 MUSKO15146 869 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 NKRFO15226 690 aaKnown RBP eCLIP5.31□□□□□ -1.56
CDH1-211ENST00000567320 ZNF623O75123 536 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 AMHP03971 560 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 SOD2P04179 222 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 SELENOPP49908 381 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 GPR85P60893 370 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 HS1BP3Q53T59 392 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 PROSER1Q86XN7 944 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 ZFPM1Q8IX07 1006 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 GNRHR2Q96P88 292 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 LMF1Q96S06 567 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 TACO1Q9BSH4 297 aaKnown RBP5.31□□□□□ -1.56
CDH1-211ENST00000567320 TINF2Q9BSI4 451 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 TRIM55Q9BYV6 548 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 SCAND2PQ9GZW5 306 aaPredicted RBP5.31□□□□□ -1.56
CDH1-211ENST00000567320 CD248Q9HCU0 757 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 HSPBP1Q9NZL4 362 aa5.31□□□□□ -1.56
CDH1-211ENST00000567320 PPP1R1BQ9UD71 204 aaPredicted RBP5.31□□□□□ -1.56
CDH1-211ENST00000567320 KLHL18O94889 574 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 KNG1P01042 644 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 CAPNS1P04632 268 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 FGFR1P11362 822 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 COL6A1P12109 1028 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 HMGA2P52926 109 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 CDSNQ15517 529 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 CD276Q5ZPR3 534 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 KCTD1Q719H9 257 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 DPH6Q7L8W6 267 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 LRRC47Q8N1G4 583 aaKnown RBP5.3□□□□□ -1.56
CDH1-211ENST00000567320 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDH1-211ENST00000567320 ZFYVE21Q9BQ24 234 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 ZNF341Q9BYN7 854 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 CD244Q9BZW8 370 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 IPPKQ9H8X2 491 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 ARHGEF4Q9NR80 690 aa5.3□□□□□ -1.56
CDH1-211ENST00000567320 PATE3B3GLJ2 98 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 FZD7O75084 574 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 CHGBP05060 677 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 NTRK3Q16288 839 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 SPDYAQ5MJ70 313 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 YOD1Q5VVQ6 348 aaPredicted RBP5.29□□□□□ -1.56
CDH1-211ENST00000567320 STYK1Q6J9G0 422 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 DNERQ8NFT8 737 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 OSBP2Q969R2 916 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 SORCS2Q96PQ0 1159 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 MEGF9Q9H1U4 602 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 SLC39A2Q9NP94 309 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 TELO2Q9Y4R8 837 aa5.29□□□□□ -1.56
CDH1-211ENST00000567320 ZNF839A8K0R7 811 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 U2SURPO15042 1029 aaKnown RBP5.28□□□□□ -1.56
CDH1-211ENST00000567320 SUV39H1O43463 412 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 CNOT4O95628 575 aaKnown RBP5.28□□□□□ -1.56
CDH1-211ENST00000567320 USP10Q14694 798 aaKnown RBP5.28□□□□□ -1.56
CDH1-211ENST00000567320 BTBD8Q5XKL5 378 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 MTDHQ86UE4 582 aaKnown RBP5.28□□□□□ -1.56
CDH1-211ENST00000567320 Q8TCH9 128 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 IPO9Q96P70 1041 aaKnown RBP5.28□□□□□ -1.56
CDH1-211ENST00000567320 CDC6Q99741 560 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 ZNF747Q9BV97 191 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 MRIQ9BWK5 157 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 SEC61A2Q9H9S3 476 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 KCND1Q9NSA2 647 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 CATSPERZQ9NTU4 200 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 RIC8BQ9NVN3 520 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 ARHGAP28Q9P2N2 729 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 HS3ST3A1Q9Y663 406 aa5.28□□□□□ -1.56
CDH1-211ENST00000567320 ESYT3A0FGR9 886 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 CCDC85CA6NKD9 419 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 CSF2RBP32927 897 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 RRADP55042 308 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 CRIP3Q6Q6R5 217 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 TAX1BP1Q86VP1 789 aa5.27□□□□□ -1.57
CDH1-211ENST00000567320 REXO1L1PQ8IX06 675 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms