RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 CLUL1Q15846 466 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 CLP1Q92989 425 aaKnown RBP23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 PPP2R3CQ969Q6 453 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 INPP4AQ96PE3 977 aaPredicted RBP23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 UTP14CQ5TAP6 766 aaKnown RBP23.37■■□□□ 1.33
PDXDC1-213ENST00000566426 TAF2Q6P1X5 1199 aa23.37■■□□□ 1.33
PDXDC1-213ENST00000566426 RSPH3Q86UC2 560 aa23.37■■□□□ 1.33
PDXDC1-213ENST00000566426 LMBR1Q8WVP7 490 aa23.37■■□□□ 1.33
PDXDC1-213ENST00000566426 PIGSQ96S52 555 aa23.37■■□□□ 1.33
PDXDC1-213ENST00000566426 PLVAPQ9BX97 442 aa23.37■■□□□ 1.33
PDXDC1-213ENST00000566426 RIOX1Q9H6W3 641 aa23.37■■□□□ 1.33
PDXDC1-213ENST00000566426 MUTYHQ9UIF7 546 aa23.37■■□□□ 1.33
PDXDC1-213ENST00000566426 CHRNA1P02708 482 aa23.36■■□□□ 1.33
PDXDC1-213ENST00000566426 MRPS9P82933 396 aaKnown RBP23.36■■□□□ 1.33
PDXDC1-213ENST00000566426 DLX2Q07687 328 aaPredicted RBP23.36■■□□□ 1.33
PDXDC1-213ENST00000566426 BTG3Q14201 252 aaPredicted RBP23.36■■□□□ 1.33
PDXDC1-213ENST00000566426 SEC23AQ15436 765 aa23.36■■□□□ 1.33
PDXDC1-213ENST00000566426 RNF135Q8IUD6 432 aa23.36■■□□□ 1.33
PDXDC1-213ENST00000566426 IGFLR1Q9H665 355 aa23.36■■□□□ 1.33
PDXDC1-213ENST00000566426 CD207Q9UJ71 328 aa23.36■■□□□ 1.33
PDXDC1-213ENST00000566426 PNMA6FA0A0J9YX94 578 aa23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 STXBP3O00186 592 aa23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 LINC00271P0C7V0 271 aa23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 GHRP10912 638 aa23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 TRIM50Q86XT4 487 aa23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 GIMAP8Q8ND71 665 aaPredicted RBP23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 SENP7Q9BQF6 1050 aa23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 EHMT1Q9H9B1 1298 aa23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 RTEL1Q9NZ71 1219 aa23.35■■□□□ 1.33
PDXDC1-213ENST00000566426 C5orf42Q9H799 3197 aa23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 ZNF318Q5VUA4 2279 aa23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 KAT6AQ92794 2004 aa23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 ENPP3O14638 875 aa23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 MMP1P03956 469 aa23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 TRDNQ13061 729 aa23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 PKN1Q16512 942 aa23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 EDAQ92838 391 aa23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 RC3H2Q9HBD1 1191 aaKnown RBP23.34■■□□□ 1.33
PDXDC1-213ENST00000566426 FRMPD4Q14CM0 1322 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 TRIOO75962 3097 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 SEMA3FQ13275 785 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 ADAM15Q13444 863 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 GRM4Q14833 912 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 XRRA1Q6P2D8 792 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 BMP8AQ7Z5Y6 402 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 P2RX5Q93086 422 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 ZNF689Q96CS4 500 aaPredicted RBP23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 OSBPL3Q9H4L5 887 aa23.33■■□□□ 1.33
PDXDC1-213ENST00000566426 TBX10O75333 385 aa23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 NDUFV1P49821 464 aa23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 RRP1P56182 461 aaKnown RBP23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 SP4Q02446 784 aa23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 LPIN1Q14693 890 aa23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 NAALADL2Q58DX5 795 aa23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 NLRX1Q86UT6 975 aa23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 PRRX2Q99811 253 aa23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 ALG13Q9NP73 1137 aaKnown RBP23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 PLAGL2Q9UPG8 496 aa23.32■■□□□ 1.32
PDXDC1-213ENST00000566426 ERICH2A1L162 156 aa23.31■■□□□ 1.32
PDXDC1-213ENST00000566426 DGKIO75912 1065 aa23.31■■□□□ 1.32
PDXDC1-213ENST00000566426 RPLP2P05387 115 aaKnown RBP23.31■■□□□ 1.32
PDXDC1-213ENST00000566426 PPFIA1Q13136 1202 aa23.31■■□□□ 1.32
PDXDC1-213ENST00000566426 CYB5R4Q7L1T6 521 aa23.31■■□□□ 1.32
PDXDC1-213ENST00000566426 PLEKHM2Q8IWE5 1019 aa23.31■■□□□ 1.32
PDXDC1-213ENST00000566426 CUL5Q93034 780 aa23.31■■□□□ 1.32
PDXDC1-213ENST00000566426 CYTH3O43739 400 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 CSPG5O95196 566 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 EYA4O95677 639 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 GTF2F1P35269 517 aaKnown RBP eCLIP23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 PTPN5P54829 565 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 MGAT3Q09327 533 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 SLC35G1Q2M3R5 365 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 FBXO47Q5MNV8 452 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 PCNX4Q63HM2 1172 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 B4GALNT3Q6L9W6 998 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 RUFY4Q6ZNE9 571 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 TSHZ1Q6ZSZ6 1077 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 SMARCC2Q8TAQ2 1214 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 ERAP1Q9NZ08 941 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 TUBE1Q9UJT0 475 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 SUPT16HQ9Y5B9 1047 aaKnown RBP23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 TTC3P53804 2025 aa23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 BAZ2BQ9UIF8 2168 aaKnown RBP23.3■■□□□ 1.32
PDXDC1-213ENST00000566426 IFIT3O14879 490 aaKnown RBP23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 LINC01565O15544 149 aa23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 TCF7P36402 384 aaPredicted RBP23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 TRIM67Q6ZTA4 783 aa23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 CHD1LQ86WJ1 897 aa23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 CMTR2Q8IYT2 770 aaKnown RBP23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 PBXIP1Q96AQ6 731 aa23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 CDHR1Q96JP9 859 aa23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 MSLNLQ96KJ4 702 aa23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 FTHL17Q9BXU8 183 aa23.29■■□□□ 1.32
PDXDC1-213ENST00000566426 ATG2AQ2TAZ0 1938 aa23.28■■□□□ 1.32
PDXDC1-213ENST00000566426 TMEM221A6NGB7 291 aa23.28■■□□□ 1.32
PDXDC1-213ENST00000566426 M0R296 226 aa23.28■■□□□ 1.32
PDXDC1-213ENST00000566426 CAMK1Q14012 370 aa23.28■■□□□ 1.32
PDXDC1-213ENST00000566426 SART3Q15020 963 aaKnown RBP23.28■■□□□ 1.32
PDXDC1-213ENST00000566426 GRIK4Q16099 956 aa23.28■■□□□ 1.32
PDXDC1-213ENST00000566426 SUGP1Q8IWZ8 645 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms