RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
NSMCE1-211ENST00000566087 LIMCH1Q9UPQ0 1083 aa12.19□□□□□ -0.46
NSMCE1-211ENST00000566087 MTCH2Q9Y6C9 303 aa12.19□□□□□ -0.46
NSMCE1-211ENST00000566087 BDP1A6H8Y1 2624 aa12.19□□□□□ -0.46
NSMCE1-211ENST00000566087 TRANK1O15050 2925 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 FRMPD4Q14CM0 1322 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 SPATA31C2B4DYI2 1134 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 STXBP3O00186 592 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 DEXIO95424 95 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 PURAQ00577 322 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 CELF3Q5SZQ8 465 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 NFRKBQ6P4R8 1299 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 REXO1Q8N1G1 1221 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 AFG1LQ8WV93 481 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 TNPO1Q92973 898 aaKnown RBP12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 GPRASP2Q96D09 838 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 ZSCAN31Q96LW9 406 aaPredicted RBP12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 SPATA33Q96N06 139 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 INPP4AQ96PE3 977 aaPredicted RBP12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 C1QTNF1Q9BXJ1 281 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 ZMYND12Q9H0C1 365 aa12.18□□□□□ -0.46
NSMCE1-211ENST00000566087 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 GGPS1O95749 300 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 HSP90AA1P07900 732 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 NLRP5P59047 1200 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 ARHGAP1Q07960 439 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 MYSM1Q5VVJ2 828 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 ARNTL2Q8WYA1 636 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 PHKBQ93100 1093 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 TMX3Q96JJ7 454 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 LRFN3Q9BTN0 628 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 RTEL1Q9NZ71 1219 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 PRRC2BQ5JSZ5 2229 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-211ENST00000566087 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 PFKFB2O60825 505 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 MMP3P08254 477 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 MRPS9P82933 396 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 STK3Q13188 491 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 MTMR1Q13613 665 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 NTRK3Q16288 839 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 AAK1Q2M2I8 961 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 FAM47CQ5HY64 1035 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 METTL7BQ6UX53 244 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 CCDC155Q8N6L0 562 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 C7orf31Q8N865 590 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 COPS5Q92905 334 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 KHSRPQ92945 711 aaKnown RBP eCLIP12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 JADE2Q9NQC1 790 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 TCEAL9Q9UHQ7 104 aa12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 COL4A4P53420 1690 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-211ENST00000566087 PTPRSQ13332 1948 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 FAM86C2PA6NEL3 165 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 TLL1O43897 1013 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 ARIH2O95376 493 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 GNAT1P11488 350 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 TAP1Q03518 808 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 CUL4AQ13619 759 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 UBE2SQ16763 222 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 CEP55Q53EZ4 464 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 NIPA1Q7RTP0 329 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 MXRA8Q9BRK3 442 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 SDF4Q9BRK5 362 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 ANO3Q9BYT9 981 aa12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 NCOA5Q9HCD5 579 aaKnown RBP12.15□□□□□ -0.46
NSMCE1-211ENST00000566087 NCOR1O75376 2440 aa12.15□□□□□ -0.47
NSMCE1-211ENST00000566087 TANC1Q9C0D5 1861 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 RGS20O76081 388 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 PFKMP08237 780 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 ACTN1P12814 892 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 POU3F3P20264 500 aaPredicted RBP12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 UBA1P22314 1058 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 SREBF1P36956 1147 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 USP11P51784 963 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 CHMP4BP1P59074 171 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 BFSP2Q13515 415 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 PKN1Q16512 942 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 CYFIP1Q7L576 1253 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 TMCO2Q7Z6W1 182 aaPredicted RBP12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 HERC6Q8IVU3 1022 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 IL31RAQ8NI17 732 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 INTS4Q96HW7 963 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 FTOQ9C0B1 505 aaKnown RBP eCLIP12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 UBIAD1Q9Y5Z9 338 aa12.14□□□□□ -0.47
NSMCE1-211ENST00000566087 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
NSMCE1-211ENST00000566087 LCHNA4D1U4 455 aa12.13□□□□□ -0.47
NSMCE1-211ENST00000566087 H3BRB1 525 aa12.13□□□□□ -0.47
NSMCE1-211ENST00000566087 PARNO95453 639 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-211ENST00000566087 CYP3A4P08684 503 aa12.13□□□□□ -0.47
NSMCE1-211ENST00000566087 IQCF3P0C7M6 154 aa12.13□□□□□ -0.47
NSMCE1-211ENST00000566087 CLK2P49760 499 aaKnown RBP12.13□□□□□ -0.47
NSMCE1-211ENST00000566087 ARHGAP4P98171 946 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms