RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SPAG1Q07617 926 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 HSP90AA4PQ58FG1 418 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 CCDC186Q7Z3E2 898 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 MIER3Q7Z3K6 550 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 FAM43AQ8N2R8 423 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 NACC1Q96RE7 527 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 PAGR1Q9BTK6 254 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 SLC39A2Q9NP94 309 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 PKD2L1Q9P0L9 805 aa21.79■■□□□ 1.08
CLN6-205ENST00000564846 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.79■■□□□ 1.08
CLN6-205ENST00000564846 CNMDO75829 334 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 KRT18P05783 430 aaKnown RBP21.78■■□□□ 1.08
CLN6-205ENST00000564846 CCNE1P24864 410 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 COASYQ13057 564 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 ARSHQ5FYA8 562 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 NCAPG2Q86XI2 1143 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 GUF1Q8N442 669 aaKnown RBP21.78■■□□□ 1.08
CLN6-205ENST00000564846 P2RX5Q93086 422 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 CDHR1Q96JP9 859 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 NAP1L5Q96NT1 182 aaPredicted RBP21.78■■□□□ 1.08
CLN6-205ENST00000564846 CTAGE1Q96RT6 745 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 MOV10L1Q9BXT6 1211 aaKnown RBP21.78■■□□□ 1.08
CLN6-205ENST00000564846 NRBP1Q9UHY1 535 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 PNMA3Q9UL41 463 aa21.78■■□□□ 1.08
CLN6-205ENST00000564846 DDX39AO00148 427 aaKnown RBP21.77■■□□□ 1.08
CLN6-205ENST00000564846 C2orf69Q8N8R5 385 aa21.77■■□□□ 1.08
CLN6-205ENST00000564846 NOC3LQ8WTT2 800 aaKnown RBP21.77■■□□□ 1.08
CLN6-205ENST00000564846 GTF3C2Q8WUA4 911 aaPredicted RBP21.77■■□□□ 1.08
CLN6-205ENST00000564846 BHMT2Q9H2M3 363 aa21.77■■□□□ 1.08
CLN6-205ENST00000564846 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.77■■□□□ 1.08
CLN6-205ENST00000564846 TCEAL9Q9UHQ7 104 aa21.77■■□□□ 1.08
CLN6-205ENST00000564846 FRMD3A2A2Y4 597 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 PTGS1P23219 599 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 KRT76Q01546 638 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 TTI2Q6NXR4 508 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.76■■□□□ 1.07
CLN6-205ENST00000564846 HPS3Q969F9 1004 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 RBPJLQ9UBG7 517 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 PEX10O60683 326 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 P4HBP07237 508 aaKnown RBP21.76■■□□□ 1.07
CLN6-205ENST00000564846 CETPP11597 493 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 SFNP31947 248 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 JAK3P52333 1124 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 GTF2A2P52657 109 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 PMS1P54277 932 aaKnown RBP21.76■■□□□ 1.07
CLN6-205ENST00000564846 CCDC144BQ3MJ40 725 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 GNPTABQ3T906 1256 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 FAM26FQ5R3K3 315 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 ANKRD20A12PQ8NF67 263 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 TRIM47Q96LD4 638 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 LXNQ9BS40 222 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 SLC45A1Q9Y2W3 748 aa21.76■■□□□ 1.07
CLN6-205ENST00000564846 TRIM49BA6NDI0 452 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 ATP9AO75110 1047 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 COBLO75128 1261 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 ERCC3P19447 782 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 GSDMDP57764 484 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 GIT2Q14161 759 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 FILIP1Q7Z7B0 1213 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 ZNF830Q96NB3 372 aaPredicted RBP21.75■■□□□ 1.07
CLN6-205ENST00000564846 THAP9Q9H5L6 903 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 ZSWIM4Q9H7M6 989 aa21.75■■□□□ 1.07
CLN6-205ENST00000564846 ADD3Q9UEY8 706 aaKnown RBP21.75■■□□□ 1.07
CLN6-205ENST00000564846 NPHP3-ACAD11A0A0J9YXS1 232 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 A0A1B0GTH6 734 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 LRRC10BA6NIK2 292 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 POTEB2H3BUK9 544 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 CELF2O95319 508 aaKnown RBP21.74■■□□□ 1.07
CLN6-205ENST00000564846 STXBP2Q15833 593 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 HERC4Q5GLZ8 1057 aaPredicted RBP21.74■■□□□ 1.07
CLN6-205ENST00000564846 CENPPQ6IPU0 288 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 FOXR2Q6PJQ5 311 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 TMC6Q7Z403 805 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 RDM1Q8NG50 284 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 PIGOQ8TEQ8 1089 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 TXNRD2Q9NNW7 524 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 KCND2Q9NZV8 630 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 LIMA1Q9UHB6 759 aaKnown RBP21.74■■□□□ 1.07
CLN6-205ENST00000564846 SAMM50Q9Y512 469 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 WDR64B1ANS9 1081 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 EIF3JO75822 258 aaKnown RBP21.74■■□□□ 1.07
CLN6-205ENST00000564846 RGS20O76081 388 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 KIF20AO95235 890 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 CNTN2Q02246 1040 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 NR1I3Q14994 352 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 FILIP1LQ4L180 1135 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 ZNF746Q6NUN9 644 aaPredicted RBP21.74■■□□□ 1.07
CLN6-205ENST00000564846 APTXQ7Z2E3 356 aaKnown RBP21.74■■□□□ 1.07
CLN6-205ENST00000564846 VSTM4Q8IW00 320 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 SENP7Q9BQF6 1050 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 REEP2Q9BRK0 252 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 INTS13Q9NVM9 706 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 PCDHA2Q9Y5H9 948 aa21.74■■□□□ 1.07
CLN6-205ENST00000564846 LYPLA2O95372 231 aa21.73■■□□□ 1.07
CLN6-205ENST00000564846 QARSP47897 775 aaKnown RBP21.73■■□□□ 1.07
CLN6-205ENST00000564846 ALDH5A1P51649 535 aaPredicted RBP21.73■■□□□ 1.07
CLN6-205ENST00000564846 TCP11X2Q5H9J9 407 aa21.73■■□□□ 1.07
CLN6-205ENST00000564846 ANKRD40Q6AI12 368 aa21.73■■□□□ 1.07
CLN6-205ENST00000564846 RINT1Q6NUQ1 792 aa21.73■■□□□ 1.07
CLN6-205ENST00000564846 MYOCDQ8IZQ8 938 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms