RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 IFRD2Q12894 506 aaPredicted RBP4.78□□□□□ -1.64
CHD9-211ENST00000564600 PRR31Q5SQ13 230 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 PHF19Q5T6S3 580 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 TEPPQ6URK8 271 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 RSPO2Q6UXX9 243 aaPredicted RBP4.78□□□□□ -1.64
CHD9-211ENST00000564600 PROSER1Q86XN7 944 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 ZBTB38Q8NAP3 1195 aaPredicted RBP4.78□□□□□ -1.64
CHD9-211ENST00000564600 ZNF669Q96BR6 464 aaPredicted RBP4.78□□□□□ -1.64
CHD9-211ENST00000564600 WWC2-AS2Q96NR7 200 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 CD248Q9HCU0 757 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 SLC6A20Q9NP91 592 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 SNTG2Q9NY99 539 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 DTLQ9NZJ0 730 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 SIRPGQ9P1W8 387 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 MYOTQ9UBF9 498 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 ASH2LQ9UBL3 628 aa4.78□□□□□ -1.64
CHD9-211ENST00000564600 KDM2BQ8NHM5 1336 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 NPEPPSL1A6NEC2 478 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 CYR61O00622 381 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 SOD2P04179 222 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 HABP4Q5JVS0 413 aaKnown RBP4.77□□□□□ -1.65
CHD9-211ENST00000564600 FAM26FQ5R3K3 315 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 NBPF6Q5VWK0 638 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 PRAMEF18Q5VWM3 479 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 BORAQ6PGQ7 559 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 OTOP3Q7RTS5 596 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 SH3RF2Q8TEC5 729 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 TOE1Q96GM8 510 aaKnown RBP4.77□□□□□ -1.65
CHD9-211ENST00000564600 NBPF4Q96M43 638 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 DEF6Q9H4E7 631 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 SMOC1Q9H4F8 434 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 IPPKQ9H8X2 491 aa4.77□□□□□ -1.65
CHD9-211ENST00000564600 TRBV23-1A0A0A0MS06 115 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 FZD7O75084 574 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 CYP1A1P04798 512 aaPredicted RBP4.76□□□□□ -1.65
CHD9-211ENST00000564600 MLLT6P55198 1093 aaPredicted RBP4.76□□□□□ -1.65
CHD9-211ENST00000564600 GPR85P60893 370 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 IGFL4Q6B9Z1 124 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 TMC5Q6UXY8 1006 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 ZC3H18Q86VM9 953 aaKnown RBP4.76□□□□□ -1.65
CHD9-211ENST00000564600 SCUBE1Q8IWY4 988 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 IFNL3Q8IZI9 196 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 PMFBP1Q8TBY8 1022 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 LCORQ96JN0 433 aaPredicted RBP4.76□□□□□ -1.65
CHD9-211ENST00000564600 DEPDC7Q96QD5 511 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 DNAJC7Q99615 494 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 YIPF4Q9BSR8 244 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 JADE2Q9NQC1 790 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 PCDHA8Q9Y5H6 950 aa4.76□□□□□ -1.65
CHD9-211ENST00000564600 NKX3-2P78367 333 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 TUSC3Q13454 348 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 CHRNA2Q15822 529 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 KIZQ2M2Z5 673 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 FAM124AQ86V42 546 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 UHMK1Q8TAS1 419 aaKnown RBP4.75□□□□□ -1.65
CHD9-211ENST00000564600 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.75□□□□□ -1.65
CHD9-211ENST00000564600 MBD6Q96DN6 1003 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 DNAJC2Q99543 621 aaKnown RBP4.75□□□□□ -1.65
CHD9-211ENST00000564600 CDC6Q99741 560 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 ZFYVE21Q9BQ24 234 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 HIRIP3Q9BW71 556 aaPredicted RBP4.75□□□□□ -1.65
CHD9-211ENST00000564600 CD244Q9BZW8 370 aa4.75□□□□□ -1.65
CHD9-211ENST00000564600 ACOT7O00154 380 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 KRIT1O00522 736 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 GNAT1P11488 350 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 ZNF28P17035 718 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 CIR1Q86X95 450 aaPredicted RBP4.74□□□□□ -1.65
CHD9-211ENST00000564600 LILRB2Q8N423 598 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 PCDH19Q8TAB3 1148 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 ZCCHC14Q8WYQ9 949 aaKnown RBP4.74□□□□□ -1.65
CHD9-211ENST00000564600 PTPRN2Q92932 1015 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 ARMC5Q96C12 935 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 ZNF341Q9BYN7 854 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 CROTQ9UKG9 612 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 MRPS23Q9Y3D9 190 aaKnown RBP4.74□□□□□ -1.65
CHD9-211ENST00000564600 PCDHA9Q9Y5H5 950 aa4.74□□□□□ -1.65
CHD9-211ENST00000564600 NPIPB8E9PQR5 432 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 KCNK3O14649 394 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 B4GALT4O60513 344 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 AMY2AP04746 511 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 COL6A1P12109 1028 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 AMY2BP19961 511 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 SUMO1P63165 101 aaKnown RBP4.73□□□□□ -1.65
CHD9-211ENST00000564600 R3HDM1Q15032 1099 aaKnown RBP4.73□□□□□ -1.65
CHD9-211ENST00000564600 CYP4F22Q6NT55 531 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 TTLL6Q8N841 843 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 TTLL11Q8NHH1 800 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 PHOSPHO1Q8TCT1 267 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 SRPK1Q96SB4 655 aaKnown RBP4.73□□□□□ -1.65
CHD9-211ENST00000564600 DHRS4Q9BTZ2 278 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 SLC52A2Q9HAB3 445 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 DSEQ9UL01 958 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 CBLCQ9ULV8 474 aa4.73□□□□□ -1.65
CHD9-211ENST00000564600 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.72□□□□□ -1.65
CHD9-211ENST00000564600 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.72□□□□□ -1.65
CHD9-211ENST00000564600 FAM90A27PA6NNH2 459 aa4.72□□□□□ -1.65
CHD9-211ENST00000564600 FAM47E-STBD1D6RA91 191 aa4.72□□□□□ -1.65
CHD9-211ENST00000564600 CRTAMO95727 393 aa4.72□□□□□ -1.65
CHD9-211ENST00000564600 SRGAP2CP0DJJ0 459 aa4.72□□□□□ -1.65
CHD9-211ENST00000564600 PYGMP11217 842 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms