RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 CLDN3O15551 220 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 PFKFB1P16118 471 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 NSUN2Q08J23 767 aaKnown RBP eCLIP13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 SLC10A5Q5PT55 438 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 UHMK1Q8TAS1 419 aaKnown RBP13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 PSMD14O00487 310 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 PRPSAP2O60256 369 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 DNAJC24Q6P3W2 148 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 ANGPTL8Q6UXH0 198 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 ARHGEF18Q6ZSZ5 1173 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 SUGT1Q9Y2Z0 365 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 USP6P35125 1406 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 FAM135BQ49AJ0 1406 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 CYFIP1Q7L576 1253 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 SLC44A5Q8NCS7 719 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 ZNF274Q96GC6 653 aaPredicted RBP13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 SRPK1Q96SB4 655 aaKnown RBP13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 RABEP2Q9H5N1 569 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 PLXNC1O60486 1568 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 SNX1Q13596 522 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 VPS72Q15906 364 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 PSPC1Q8WXF1 523 aaKnown RBP13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 ARHGEF2Q92974 986 aaKnown RBP13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 PARVGQ9HBI0 331 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 SMC5Q8IY18 1101 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 SPON2Q9BUD6 331 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 BAG5Q9UL15 447 aa13.07□□□□□ -0.32
TUBGCP4-208ENST00000564079 MYO1FO00160 1098 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 ASMTLO95671 621 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 KRT3P12035 628 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 CDC25AP30304 524 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 MAPK4P31152 587 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 GRIK1P39086 918 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 JAK3P52333 1124 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 ADKP55263 362 aaKnown RBP13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 CDR2Q01850 454 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 CCDC62Q6P9F0 684 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 DARS2Q6PI48 645 aaKnown RBP13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 IFT20Q8IY31 132 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 SH3KBP1Q96B97 665 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 ZWILCHQ9H900 591 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 GABBR1Q9UBS5 961 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 A0A087WWV3 80 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 CYP27B1O15528 508 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 KRT1P04264 644 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 CETPP11597 493 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 PDE1BQ01064 536 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 NOLC1Q14978 699 aaKnown RBP eCLIP13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 NUDT12Q9BQG2 462 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 POLD4Q9HCU8 107 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 PCDHB7Q9Y5E2 793 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 ADORA2BP29275 332 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 LONP1P36776 959 aaKnown RBP13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 GRK7Q8WTQ7 553 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 HP1BP3Q5SSJ5 553 aaPredicted RBP13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 ASIC4Q96FT7 647 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 F8W8V4 182 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 TNFAIP2Q03169 654 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 CDKL2Q92772 493 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 IFT43Q96FT9 208 aa13.06□□□□□ -0.32
TUBGCP4-208ENST00000564079 KRIT1O00522 736 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 ZNF667Q5HYK9 610 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 RUFY4Q6ZNE9 571 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 IFT122Q9HBG6 1241 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 ENTPD7Q9NQZ7 604 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 CYP2E1P05181 493 aaPredicted RBP13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 CCDC13Q8IYE1 715 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 CCDC170Q8IYT3 715 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 DPH5Q9H2P9 285 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 SURF1Q15526 300 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 SDE2Q6IQ49 451 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 RNF180Q86T96 592 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 F5H423 210 aaPredicted RBP13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 PPFIA4O75335 1185 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 CFAP221Q4G0U5 840 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 LRRC31Q6UY01 552 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 SARS2Q9NP81 518 aaKnown RBP13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 AFF4Q9UHB7 1163 aaKnown RBP13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 MYO5CQ9NQX4 1742 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 PRR23AA6NEV1 266 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 RSPH10B2B2RC85 870 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 PI4K2BG5E9Z4 385 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 ALDH1A1P00352 501 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 RSPH10BP0C881 870 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 GPC3P51654 580 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 CLIC4Q9Y696 253 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 HMBSP08397 361 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 ATF2P15336 505 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 NME3Q13232 169 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 SLC15A2Q16348 729 aa13.05□□□□□ -0.32
TUBGCP4-208ENST00000564079 GNASQ5JWF2 1037 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms