RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 ZNF646O15015 1829 aaPredicted RBP22.07■■□□□ 1.12
MSLN-205ENST00000563941 PRLRP16471 622 aa22.07■■□□□ 1.12
MSLN-205ENST00000563941 HMGB2P26583 209 aaKnown RBP22.07■■□□□ 1.12
MSLN-205ENST00000563941 FKBP1AP62942 108 aaKnown RBP22.07■■□□□ 1.12
MSLN-205ENST00000563941 HDLBPQ00341 1268 aaKnown RBP22.07■■□□□ 1.12
MSLN-205ENST00000563941 SFMBT2Q5VUG0 894 aa22.07■■□□□ 1.12
MSLN-205ENST00000563941 MCTP2Q6DN12 878 aa22.07■■□□□ 1.12
MSLN-205ENST00000563941 CATSPER3Q86XQ3 398 aa22.07■■□□□ 1.12
MSLN-205ENST00000563941 ZC3H3Q8IXZ2 948 aaKnown RBP22.07■■□□□ 1.12
MSLN-205ENST00000563941 SYN2Q92777 582 aaPredicted RBP22.07■■□□□ 1.12
MSLN-205ENST00000563941 ACBD3Q9H3P7 528 aa22.07■■□□□ 1.12
MSLN-205ENST00000563941 TBX3O15119 743 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 USH1GQ495M9 461 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 SLC9C1Q4G0N8 1177 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 Q4G0T1 1027 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 FBXO11Q86XK2 927 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 GMCL1P1Q8NEA9 526 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 COG1Q8WTW3 980 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 SALL4Q9UJQ4 1053 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 RBAK-RBAKDNI3L0D1 243 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 ECE2O60344 883 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 TLR2O60603 784 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 NDUFB10O96000 172 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 SERPING1P05155 500 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 POLR2FP61218 127 aaKnown RBP22.06■■□□□ 1.12
MSLN-205ENST00000563941 RASSF7Q02833 373 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 IKQ13123 557 aaPredicted RBP22.06■■□□□ 1.12
MSLN-205ENST00000563941 ABCB5Q2M3G0 1257 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 PPP4R3CPQ6ZMV5 832 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 ERMNQ8TAM6 284 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 CCDC102AQ96A19 550 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 GMCL1Q96IK5 515 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 OSBPL9Q96SU4 736 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 CRACR2AQ9BSW2 395 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 FAM184BQ9ULE4 1060 aa22.06■■□□□ 1.12
MSLN-205ENST00000563941 SPDYE3A6NKU9 549 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 NPM3O75607 178 aaKnown RBP22.05■■□□□ 1.12
MSLN-205ENST00000563941 ZMYND10O75800 440 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 TNNT3P45378 269 aaPredicted RBP22.05■■□□□ 1.12
MSLN-205ENST00000563941 ADAM9Q13443 819 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 EDRF1Q3B7T1 1238 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 HSP90B2PQ58FF3 399 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 SYDE2Q5VT97 1194 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 ZNF572Q7Z3I7 529 aaPredicted RBP22.05■■□□□ 1.12
MSLN-205ENST00000563941 ANKRD13CQ8N6S4 541 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 AKT1S1Q96B36 256 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 LENG9Q96B70 501 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 VIPAS39Q9H9C1 493 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 PSD3Q9NYI0 1048 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 HYOU1Q9Y4L1 999 aa22.05■■□□□ 1.12
MSLN-205ENST00000563941 TCP1P17987 556 aaKnown RBP22.04■■□□□ 1.12
MSLN-205ENST00000563941 SREBF1P36956 1147 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 PSMC6P62333 389 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 NFRKBQ6P4R8 1299 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 FAM71BQ8TC56 605 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 FAN1Q9Y2M0 1017 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 FAM86B1E9PN63 330 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 MEIS1O00470 390 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 FAM86B2P0C5J1 330 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 SPATA31C1P0DKV0 1188 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 RPA1P27694 616 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 CASP5P51878 434 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 APBA1Q02410 837 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 PABPC4Q13310 644 aaKnown RBP eCLIP22.04■■□□□ 1.12
MSLN-205ENST00000563941 GIT2Q14161 759 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 MMGT1Q8N4V1 131 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 DNM3Q9UQ16 869 aa22.04■■□□□ 1.12
MSLN-205ENST00000563941 CETN3O15182 167 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 FOSP01100 380 aaPredicted RBP22.03■■□□□ 1.12
MSLN-205ENST00000563941 MMP14P50281 582 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 ITIH3Q06033 890 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 CCDC70Q6NSX1 233 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 NOX5Q96PH1 765 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 SERPINA10Q9UK55 444 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 TAL1P17542 331 aaPredicted RBP22.03■■□□□ 1.12
MSLN-205ENST00000563941 NR2F2P24468 414 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 EPS15P42566 896 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 LMAN1P49257 510 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 CCNI2Q6ZMN8 369 aaPredicted RBP22.03■■□□□ 1.12
MSLN-205ENST00000563941 RNF10Q8N5U6 811 aaKnown RBP22.03■■□□□ 1.12
MSLN-205ENST00000563941 SYT2Q8N9I0 419 aaPredicted RBP22.03■■□□□ 1.12
MSLN-205ENST00000563941 REEP2Q9BRK0 252 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 MED4Q9NPJ6 270 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 CALCOCO1Q9P1Z2 691 aa22.03■■□□□ 1.12
MSLN-205ENST00000563941 NCK2O43639 380 aa22.02■■□□□ 1.12
MSLN-205ENST00000563941 BUB1O43683 1085 aa22.02■■□□□ 1.12
MSLN-205ENST00000563941 RAPGEF1Q13905 1077 aa22.02■■□□□ 1.12
MSLN-205ENST00000563941 SFR1Q86XK3 245 aa22.02■■□□□ 1.12
MSLN-205ENST00000563941 GSPT2Q8IYD1 628 aaKnown RBP22.02■■□□□ 1.12
MSLN-205ENST00000563941 FAM20AQ96MK3 541 aa22.02■■□□□ 1.12
MSLN-205ENST00000563941 PSMB7Q99436 277 aa22.02■■□□□ 1.12
MSLN-205ENST00000563941 GANQ9H2C0 597 aa22.02■■□□□ 1.12
MSLN-205ENST00000563941 HPCAL4Q9UM19 191 aa22.02■■□□□ 1.12
MSLN-205ENST00000563941 PLSCR1O15162 318 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 MYBL2P10244 700 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 BMP3P12645 472 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 CXCR5P32302 372 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 JAG1P78504 1218 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 KCNH2Q12809 1159 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 MSL1Q68DK7 614 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms