RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 ATP6V0A1Q93050 837 aa14.37□□□□□ -0.11
PKM-208ENST00000563275 NKX2-4Q9H2Z4 354 aa14.37□□□□□ -0.11
PKM-208ENST00000563275 EHMT1Q9H9B1 1298 aa14.37□□□□□ -0.11
PKM-208ENST00000563275 KCNH7Q9NS40 1196 aa14.37□□□□□ -0.11
PKM-208ENST00000563275 TMEM260Q9NX78 707 aa14.37□□□□□ -0.11
PKM-208ENST00000563275 DOCK5Q9H7D0 1870 aa14.37□□□□□ -0.11
PKM-208ENST00000563275 GBF1Q92538 1859 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 ZBBXA8MT70 800 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 TREHO43280 583 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 LGR5O75473 907 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 MYOGP15173 224 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 IFNAR1P17181 557 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 TCF7P36402 384 aaPredicted RBP14.36□□□□□ -0.11
PKM-208ENST00000563275 CNKSR3Q6P9H4 555 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 NIPA1Q7RTP0 329 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 RPAINQ86UA6 219 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 LMBR1Q8WVP7 490 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 PGBD1Q96JS3 809 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 PCYT2Q99447 389 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 RNF26Q9BY78 433 aaPredicted RBP14.36□□□□□ -0.11
PKM-208ENST00000563275 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 ZNF215Q9UL58 517 aaPredicted RBP14.36□□□□□ -0.11
PKM-208ENST00000563275 NFASCO94856 1347 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 EMSYQ7Z589 1322 aa14.36□□□□□ -0.11
PKM-208ENST00000563275 IGLV3-22A0A075B6J6 115 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 ABHD14A-ACY1A0A1B0GW23 586 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 MBLAC1A4D2B0 266 aaPredicted RBP14.35□□□□□ -0.11
PKM-208ENST00000563275 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 CYP3A4P08684 503 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 ARP10275 920 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 WDR5P61964 334 aaKnown RBP14.35□□□□□ -0.11
PKM-208ENST00000563275 ARHGAP4P98171 946 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 SP4Q02446 784 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 ITGB3BPQ13352 177 aaPredicted RBP14.35□□□□□ -0.11
PKM-208ENST00000563275 ADGRE1Q14246 886 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 PHKBQ93100 1093 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 IL17RAQ96F46 866 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.114e-10■□□□□ 10.9
PKM-208ENST00000563275 AGO4Q9HCK5 861 aaKnown RBP14.35□□□□□ -0.11
PKM-208ENST00000563275 JPH1Q9HDC5 661 aaPredicted RBP14.35□□□□□ -0.11
PKM-208ENST00000563275 TRANK1O15050 2925 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 NRCAMQ92823 1304 aa14.35□□□□□ -0.11
PKM-208ENST00000563275 FAM86B1E9PN63 330 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 ARHGEF15O94989 841 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 ATG7O95352 703 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 FAM86B2P0C5J1 330 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 GNAT1P11488 350 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 THPOP40225 353 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 FAM26DQ5JW98 314 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 UTP14CQ5TAP6 766 aaKnown RBP14.34□□□□□ -0.11
PKM-208ENST00000563275 PRDM12Q9H4Q4 367 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 SLC28A3Q9HAS3 691 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 NCOA5Q9HCD5 579 aaKnown RBP14.34□□□□□ -0.11
PKM-208ENST00000563275 ERAP1Q9NZ08 941 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 SLC9A2Q9UBY0 812 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 NAP1L2Q9ULW6 460 aaPredicted RBP14.34□□□□□ -0.11
PKM-208ENST00000563275 PTPRSQ13332 1948 aa14.34□□□□□ -0.11
PKM-208ENST00000563275 IGKV6D-21A0A0A0MT36 114 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 RSPH10B2B2RC85 870 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 DHX15O43143 795 aaKnown RBP14.33□□□□□ -0.12
PKM-208ENST00000563275 EDIL3O43854 480 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 EFCAB14O75071 495 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 CCNE2O96020 404 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 CA3P07451 260 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 RSPH10BP0C881 870 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 CIITAP33076 1130 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 DEFB103AP81534 67 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 PLEKHG4Q58EX7 1191 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 MARCH8Q5T0T0 291 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.33□□□□□ -0.121e-11■□□□□ 8.5
PKM-208ENST00000563275 REXO1Q8N1G1 1221 aaKnown RBP14.33□□□□□ -0.12
PKM-208ENST00000563275 USP38Q8NB14 1042 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 CCDC12Q8WUD4 166 aaPredicted RBP14.33□□□□□ -0.12
PKM-208ENST00000563275 ZNF274Q96GC6 653 aaPredicted RBP14.33□□□□□ -0.12
PKM-208ENST00000563275 OSBPL7Q9BZF2 842 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 UPF3BQ9BZI7 483 aaKnown RBP14.33□□□□□ -0.12
PKM-208ENST00000563275 SMARCAD1Q9H4L7 1026 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 PKD2L1Q9P0L9 805 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 CYP46A1Q9Y6A2 500 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 CUL9Q8IWT3 2517 aa14.33□□□□□ -0.12
PKM-208ENST00000563275 ACTR2P61160 394 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 TAP1Q03518 808 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 JAKMIP3Q5VZ66 844 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 PPP2R2DQ66LE6 453 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 TAF2Q6P1X5 1199 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 PLPPR4Q7Z2D5 763 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 DBF4BQ8NFT6 615 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 C6orf50Q9HD87 102 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 SH3GLB2Q9NR46 395 aa14.32□□□□□ -0.12
PKM-208ENST00000563275 GJB5O95377 273 aa14.31□□□□□ -0.12
PKM-208ENST00000563275 POU3F3P20264 500 aaPredicted RBP14.31□□□□□ -0.12
PKM-208ENST00000563275 MARK3P27448 753 aa14.31□□□□□ -0.12
PKM-208ENST00000563275 GNA11P29992 359 aa14.31□□□□□ -0.12
PKM-208ENST00000563275 CCT2P78371 535 aaKnown RBP14.31□□□□□ -0.12
PKM-208ENST00000563275 MGAT3Q09327 533 aa14.31□□□□□ -0.12
PKM-208ENST00000563275 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
PKM-208ENST00000563275 IKBKEQ14164 716 aa14.31□□□□□ -0.12
PKM-208ENST00000563275 NPY5RQ15761 445 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms